Cluster: Rep_541_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_541
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_541_c_11 | Rep_541_c_11_36 | 38020 | 39414 | + | GH23 |
| STP | Rep_541_c_11 | Rep_541_c_11_37 | 40014 | 42770 | - | B12-binding | B12-binding_2 |
| pfam | Rep_541_c_11 | Rep_541_c_11_38 | 42813 | 43265 | - | SmpB |
| TC | Rep_541_c_11 | Rep_541_c_11_39 | 43323 | 43898 | - | 9.B.29.3.6 |
| NULL(UNKNOWN) | Rep_541_c_11 | Rep_541_c_11_40 | 43902 | 44714 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_541_c_11 | Rep_541_c_11_41 | 44910 | 45407 | - | DMP19 |
| CAZyme | Rep_541_c_11 | Rep_541_c_11_42 | 45569 | 47161 | + | PL1_2 |
Gene ID: Rep_541_c_11_36
Type: CAZyme
Location: 38020 - 39414 (+)
Type: CAZyme
Location: 38020 - 39414 (+)
Gene ID: Rep_541_c_11_37
Type: STP
Location: 40014 - 42770 (-)
Type: STP
Location: 40014 - 42770 (-)
Gene ID: Rep_541_c_11_38
Type: pfam
Location: 42813 - 43265 (-)
Type: pfam
Location: 42813 - 43265 (-)
Gene ID: Rep_541_c_11_39
Type: TC
Location: 43323 - 43898 (-)
Type: TC
Location: 43323 - 43898 (-)
Gene ID: Rep_541_c_11_40
Type:
Location: 43902 - 44714 (-)
Type:
Location: 43902 - 44714 (-)
Gene ID: Rep_541_c_11_41
Type: pfam
Location: 44910 - 45407 (-)
Type: pfam
Location: 44910 - 45407 (-)
Gene ID: Rep_541_c_11_42
Type: CAZyme
Location: 45569 - 47161 (+)
Type: CAZyme
Location: 45569 - 47161 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.