PROTEIN: Rep_541_c_11_40
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Protein File & Metadata
Source:
Rep_541_c_11_40.pdb
Genome ID:
Protein ID:
Rep_541_c_11_40
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Protein Sequence
MVAALTLVMG IMMTSCLNSE GGESMYDGAF LAKVVSAGGL YGGAIFEDAG GNRYEASYKS 60 VTQLETGGYS FTGVEVAYIY FKFSVDEMGN QITPPQQNAT TPQKYQIELV AIQTAPTTDA 120 ERVETATQLK DNEYETSPIG ISQMMGNDNN YVRFDFYDES MIYTYLQWFL TNGQEEFKKH 180 NIRLAYAYDE ITAASTELRF YLCHSNGGDE GTSAMYQNWY CFKVSNALAD FERITGHQPS 240 TVKISLYEDI SSMGAMPSSR TDYTINYKAN 270
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3nqi-assembly1.cif.gz_A | 24 | 270 | 1 | 231 | 0.7605 |
0.8389 |
| 3nqi-assembly2.cif.gz_B | 26 | 270 | 1 | 229 | 0.7597 |
0.8409 |
| 3nqi-assembly3.cif.gz_C | 24 | 270 | 1 | 229 | 0.7559 |
0.837 |
| 3nqi-assembly4.cif.gz_D | 26 | 270 | 1 | 229 | 0.7541 |
0.8353 |
| 3k0y-assembly1.cif.gz_A | 26 | 270 | 1 | 192 | 0.6915 |
0.8399 |
| 4pqx-assembly1.cif.gz_A | 24 | 269 | 1 | 201 | 0.6876 |
0.8099 |
| 4pqx-assembly4.cif.gz_D | 24 | 269 | 1 | 199 | 0.6866 |
0.8111 |
| 4pqx-assembly3.cif.gz_C | 23 | 269 | 1 | 199 | 0.6817 |
0.8061 |
| 4j8q-assembly1.cif.gz_A-2 | 23 | 269 | 5 | 194 | 0.6599 |
0.8024 |
| 3k6o-assembly2.cif.gz_B | 24 | 270 | 1 | 195 | 0.6527 |
0.8084 |
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.