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Cluster: Rep_534_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_534_c_3 Rep_534_c_3_83 104342 105238 + 9.B.104.1.2
pfam Rep_534_c_3 Rep_534_c_3_84 105275 106360 + Exo_endo_phos
TC Rep_534_c_3 Rep_534_c_3_85 106678 109695 + 2.A.6.4.3
CAZyme Rep_534_c_3 Rep_534_c_3_86 109901 112777 + GH2
CAZyme Rep_534_c_3 Rep_534_c_3_87 113057 114592 - GH28
CAZyme Rep_534_c_3 Rep_534_c_3_88 114610 117375 - GH106
CAZyme Rep_534_c_3 Rep_534_c_3_89 117380 118837 - CE20
TF Rep_534_c_3 Rep_534_c_3_90 119143 120186 + HTH_AraC | HTH_AraC
CAZyme Rep_534_c_3 Rep_534_c_3_91 120233 121510 + GH28
CAZyme Rep_534_c_3 Rep_534_c_3_92 121781 123010 + GH105
CAZyme Rep_534_c_3 Rep_534_c_3_93 123034 124176 + GH105
Gene ID: Rep_534_c_3_83
Type: TC
Location: 104342 - 105238 (+)
Gene ID: Rep_534_c_3_84
Type: pfam
Location: 105275 - 106360 (+)
Gene ID: Rep_534_c_3_85
Type: TC
Location: 106678 - 109695 (+)
Gene ID: Rep_534_c_3_86
Type: CAZyme
Location: 109901 - 112777 (+)
Gene ID: Rep_534_c_3_87
Type: CAZyme
Location: 113057 - 114592 (-)
Gene ID: Rep_534_c_3_88
Type: CAZyme
Location: 114610 - 117375 (-)
Gene ID: Rep_534_c_3_89
Type: CAZyme
Location: 117380 - 118837 (-)
Gene ID: Rep_534_c_3_90
Type: TF
Location: 119143 - 120186 (+)
Gene ID: Rep_534_c_3_91
Type: CAZyme
Location: 120233 - 121510 (+)
Gene ID: Rep_534_c_3_92
Type: CAZyme
Location: 121781 - 123010 (+)
Gene ID: Rep_534_c_3_93
Type: CAZyme
Location: 123034 - 124176 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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