Cluster: Rep_534_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_534
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_534_c_2 | Rep_534_c_2_112 | 160177 | 160746 | - | 2.A.107.1.2 |
| pfam | Rep_534_c_2 | Rep_534_c_2_113 | 160743 | 161435 | - | DUF6048 |
| pfam | Rep_534_c_2 | Rep_534_c_2_114 | 161401 | 161883 | - | DUF6452 |
| CAZyme | Rep_534_c_2 | Rep_534_c_2_115 | 161898 | 162851 | - | GT2 |
Gene ID: Rep_534_c_2_112
Type: TC
Location: 160177 - 160746 (-)
Type: TC
Location: 160177 - 160746 (-)
Gene ID: Rep_534_c_2_113
Type: pfam
Location: 160743 - 161435 (-)
Type: pfam
Location: 160743 - 161435 (-)
Gene ID: Rep_534_c_2_114
Type: pfam
Location: 161401 - 161883 (-)
Type: pfam
Location: 161401 - 161883 (-)
Gene ID: Rep_534_c_2_115
Type: CAZyme
Location: 161898 - 162851 (-)
Type: CAZyme
Location: 161898 - 162851 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp003489705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.