Cluster: Rep_534_CGC41
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_534
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_534_c_52 | Rep_534_c_52_3 | 2283 | 4730 | + | GT2 |
| pfam | Rep_534_c_52 | Rep_534_c_52_4 | 4727 | 6040 | + | SpoIID |
| TC | Rep_534_c_52 | Rep_534_c_52_5 | 6044 | 7315 | + | 2.A.1.25.5 |
Gene ID: Rep_534_c_52_3
Type: CAZyme
Location: 2283 - 4730 (+)
Type: CAZyme
Location: 2283 - 4730 (+)
Gene ID: Rep_534_c_52_4
Type: pfam
Location: 4727 - 6040 (+)
Type: pfam
Location: 4727 - 6040 (+)
Gene ID: Rep_534_c_52_5
Type: TC
Location: 6044 - 7315 (+)
Type: TC
Location: 6044 - 7315 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp003489705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.