Cluster: Rep_534_CGC40
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_534
- CGC Family ID: CGCFAM_00185
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_534_c_46 | Rep_534_c_46_8 | 4964 | 6586 | + | 3.A.1.121.4 |
| pfam | Rep_534_c_46 | Rep_534_c_46_9 | 7133 | 8377 | - | Flavin_Reduct | DUF4468 |
| CAZyme | Rep_534_c_46 | Rep_534_c_46_10 | 8498 | 9481 | + | GT2 |
Gene ID: Rep_534_c_46_8
Type: TC
Location: 4964 - 6586 (+)
Type: TC
Location: 4964 - 6586 (+)
Gene ID: Rep_534_c_46_9
Type: pfam
Location: 7133 - 8377 (-)
Type: pfam
Location: 7133 - 8377 (-)
Gene ID: Rep_534_c_46_10
Type: CAZyme
Location: 8498 - 9481 (+)
Type: CAZyme
Location: 8498 - 9481 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp003489705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.