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Cluster: Rep_534_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_534_c_38 Rep_534_c_38_7 6907 8013 + 3.A.1.132.3
TC Rep_534_c_38 Rep_534_c_38_8 8284 9483 + 2.A.6.2.45
TC Rep_534_c_38 Rep_534_c_38_9 9502 12936 + 2.A.6.2.22
TC Rep_534_c_38 Rep_534_c_38_10 12933 14318 + 2.A.6.2.11
pfam Rep_534_c_38 Rep_534_c_38_11 14714 15481 + Hexapep | Hexapep | Acetyltransf_11
pfam Rep_534_c_38 Rep_534_c_38_12 15660 16238 + Ferritin | Rubrerythrin | RUBY_RBDX
TC Rep_534_c_38 Rep_534_c_38_13 16404 17255 + 1.A.23.2.1
sulfatase Rep_534_c_38 Rep_534_c_38_14 17470 19278 + S1_36
pfam Rep_534_c_38 Rep_534_c_38_15 19429 21843 + Hepar_II_III_C
CAZyme Rep_534_c_38 Rep_534_c_38_16 21840 23228 + GH29
Gene ID: Rep_534_c_38_7
Type: TC
Location: 6907 - 8013 (+)
Gene ID: Rep_534_c_38_8
Type: TC
Location: 8284 - 9483 (+)
Gene ID: Rep_534_c_38_9
Type: TC
Location: 9502 - 12936 (+)
Gene ID: Rep_534_c_38_10
Type: TC
Location: 12933 - 14318 (+)
Gene ID: Rep_534_c_38_11
Type: pfam
Location: 14714 - 15481 (+)
Gene ID: Rep_534_c_38_12
Type: pfam
Location: 15660 - 16238 (+)
Gene ID: Rep_534_c_38_13
Type: TC
Location: 16404 - 17255 (+)
Gene ID: Rep_534_c_38_14
Type: sulfatase
Location: 17470 - 19278 (+)
Gene ID: Rep_534_c_38_15
Type: pfam
Location: 19429 - 21843 (+)
Gene ID: Rep_534_c_38_16
Type: CAZyme
Location: 21840 - 23228 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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