Cluster: Rep_534_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_534
- CGC Family ID: CGCFAM_00523
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_534_c_19 | Rep_534_c_19_36 | 48111 | 50129 | + | GH13_8 |
| pfam | Rep_534_c_19 | Rep_534_c_19_37 | 50139 | 51257 | + | DUF6057 | DUF6057 |
| NULL(UNKNOWN) | Rep_534_c_19 | Rep_534_c_19_38 | 51648 | 51776 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_534_c_19 | Rep_534_c_19_39 | 51838 | 53199 | + | 2.A.66.1.37 |
Gene ID: Rep_534_c_19_36
Type: CAZyme
Location: 48111 - 50129 (+)
Type: CAZyme
Location: 48111 - 50129 (+)
Gene ID: Rep_534_c_19_37
Type: pfam
Location: 50139 - 51257 (+)
Type: pfam
Location: 50139 - 51257 (+)
Gene ID: Rep_534_c_19_38
Type:
Location: 51648 - 51776 (+)
Type:
Location: 51648 - 51776 (+)
Gene ID: Rep_534_c_19_39
Type: TC
Location: 51838 - 53199 (+)
Type: TC
Location: 51838 - 53199 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp003489705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.