Cluster: Rep_534_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_534
- CGC Family ID: CGCFAM_00770
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_534_c_19 | Rep_534_c_19_4 | 3199 | 5223 | - | GH2 |
| CAZyme | Rep_534_c_19 | Rep_534_c_19_5 | 5274 | 7235 | - | GH141 |
| NULL(UNKNOWN) | Rep_534_c_19 | Rep_534_c_19_6 | 7270 | 7503 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_534_c_19 | Rep_534_c_19_7 | 7606 | 9522 | + | 3.A.1.120.6 |
Gene ID: Rep_534_c_19_4
Type: CAZyme
Location: 3199 - 5223 (-)
Type: CAZyme
Location: 3199 - 5223 (-)
Gene ID: Rep_534_c_19_5
Type: CAZyme
Location: 5274 - 7235 (-)
Type: CAZyme
Location: 5274 - 7235 (-)
Gene ID: Rep_534_c_19_6
Type:
Location: 7270 - 7503 (-)
Type:
Location: 7270 - 7503 (-)
Gene ID: Rep_534_c_19_7
Type: TC
Location: 7606 - 9522 (+)
Type: TC
Location: 7606 - 9522 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola_A
Species
Phocaeicola_A sp003489705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.