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Cluster: Rep_531_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_531_c_44 Rep_531_c_44_14 14921 15592 - 9.B.18.1.1
CAZyme Rep_531_c_44 Rep_531_c_44_15 15582 16712 - GT4
CAZyme Rep_531_c_44 Rep_531_c_44_16 16731 17966 - GT4
CAZyme Rep_531_c_44 Rep_531_c_44_17 17963 19102 - GT4
NULL(UNKNOWN) Rep_531_c_44 Rep_531_c_44_18 19127 20449 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_531_c_44 Rep_531_c_44_19 20451 21431 - GT2
CAZyme Rep_531_c_44 Rep_531_c_44_20 21444 22313 - GT11
CAZyme Rep_531_c_44 Rep_531_c_44_21 22324 23304 - GT2
pfam Rep_531_c_44 Rep_531_c_44_22 23525 24544 - Acyl_transf_3
CAZyme Rep_531_c_44 Rep_531_c_44_23 24660 25601 - GT2
CAZyme Rep_531_c_44 Rep_531_c_44_24 25608 26408 - GT14
Gene ID: Rep_531_c_44_14
Type: TC
Location: 14921 - 15592 (-)
Gene ID: Rep_531_c_44_15
Type: CAZyme
Location: 15582 - 16712 (-)
Gene ID: Rep_531_c_44_16
Type: CAZyme
Location: 16731 - 17966 (-)
Gene ID: Rep_531_c_44_17
Type: CAZyme
Location: 17963 - 19102 (-)
Gene ID: Rep_531_c_44_18
Type:
Location: 19127 - 20449 (-)
Gene ID: Rep_531_c_44_19
Type: CAZyme
Location: 20451 - 21431 (-)
Gene ID: Rep_531_c_44_20
Type: CAZyme
Location: 21444 - 22313 (-)
Gene ID: Rep_531_c_44_21
Type: CAZyme
Location: 22324 - 23304 (-)
Gene ID: Rep_531_c_44_22
Type: pfam
Location: 23525 - 24544 (-)
Gene ID: Rep_531_c_44_23
Type: CAZyme
Location: 24660 - 25601 (-)
Gene ID: Rep_531_c_44_24
Type: CAZyme
Location: 25608 - 26408 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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