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Cluster: Rep_531_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_531_c_36 Rep_531_c_36_2 2367 4028 - 2.A.81.1.2
pfam Rep_531_c_36 Rep_531_c_36_3 4188 6377 - Gln-synt_C | GSIII_N | Gln-synt_C-ter
STP Rep_531_c_36 Rep_531_c_36_4 6432 7661 - Aminotran_1_2
TC Rep_531_c_36 Rep_531_c_36_5 7812 8699 + 2.A.115.1.2
STP Rep_531_c_36 Rep_531_c_36_6 8723 9310 + cNMP_binding
NULL(UNKNOWN) Rep_531_c_36 Rep_531_c_36_7 9345 10592 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_531_c_36 Rep_531_c_36_8 10597 12255 - 4.C.1.1.4
CAZyme Rep_531_c_36 Rep_531_c_36_9 12379 14079 - GH13_38
Gene ID: Rep_531_c_36_2
Type: TC
Location: 2367 - 4028 (-)
Gene ID: Rep_531_c_36_3
Type: pfam
Location: 4188 - 6377 (-)
Gene ID: Rep_531_c_36_4
Type: STP
Location: 6432 - 7661 (-)
Gene ID: Rep_531_c_36_5
Type: TC
Location: 7812 - 8699 (+)
Gene ID: Rep_531_c_36_6
Type: STP
Location: 8723 - 9310 (+)
Gene ID: Rep_531_c_36_7
Type:
Location: 9345 - 10592 (-)
Gene ID: Rep_531_c_36_8
Type: TC
Location: 10597 - 12255 (-)
Gene ID: Rep_531_c_36_9
Type: CAZyme
Location: 12379 - 14079 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_531_c_36_5 vegetarian > vegan 1.13891 0.04228

🧭 Explore Read Mapping of CGC

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