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Cluster: Rep_531_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_531_c_29 Rep_531_c_29_3 1724 3481 + 3.A.2.3.3
TC Rep_531_c_29 Rep_531_c_29_4 3506 4825 + 3.A.2.3.3
pfam Rep_531_c_29 Rep_531_c_29_5 4843 5448 + ATP-synt_D
TC Rep_531_c_29 Rep_531_c_29_6 5445 7253 + 3.A.2.2.2
TC Rep_531_c_29 Rep_531_c_29_7 7294 7755 + 3.A.2.2.2
CAZyme Rep_531_c_29 Rep_531_c_29_8 7996 9666 + GT3
CAZyme Rep_531_c_29 Rep_531_c_29_9 9688 12255 + GT35
Gene ID: Rep_531_c_29_3
Type: TC
Location: 1724 - 3481 (+)
Gene ID: Rep_531_c_29_4
Type: TC
Location: 3506 - 4825 (+)
Gene ID: Rep_531_c_29_5
Type: pfam
Location: 4843 - 5448 (+)
Gene ID: Rep_531_c_29_6
Type: TC
Location: 5445 - 7253 (+)
Gene ID: Rep_531_c_29_7
Type: TC
Location: 7294 - 7755 (+)
Gene ID: Rep_531_c_29_8
Type: CAZyme
Location: 7996 - 9666 (+)
Gene ID: Rep_531_c_29_9
Type: CAZyme
Location: 9688 - 12255 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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