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Cluster: Rep_531_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_531_c_26 Rep_531_c_26_38 56413 57804 + 4.A.5.1.4
pfam Rep_531_c_26 Rep_531_c_26_39 57829 58749 + KduI
TC Rep_531_c_26 Rep_531_c_26_40 58969 60426 + 2.A.1.14.25
STP Rep_531_c_26 Rep_531_c_26_41 60511 62568 - HD
pfam Rep_531_c_26 Rep_531_c_26_42 62654 64171 + tRNA-synt_1c | Anticodon_2
CAZyme Rep_531_c_26 Rep_531_c_26_43 64180 65400 + GT30
TF Rep_531_c_26 Rep_531_c_26_44 65690 66070 - GntR
NULL(UNKNOWN) Rep_531_c_26 Rep_531_c_26_45 66067 66948 - NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_531_c_26 Rep_531_c_26_46 66962 67801 - 3.A.1.132.6
Gene ID: Rep_531_c_26_38
Type: TC
Location: 56413 - 57804 (+)
Gene ID: Rep_531_c_26_39
Type: pfam
Location: 57829 - 58749 (+)
Gene ID: Rep_531_c_26_40
Type: TC
Location: 58969 - 60426 (+)
Gene ID: Rep_531_c_26_41
Type: STP
Location: 60511 - 62568 (-)
Gene ID: Rep_531_c_26_42
Type: pfam
Location: 62654 - 64171 (+)
Gene ID: Rep_531_c_26_43
Type: CAZyme
Location: 64180 - 65400 (+)
Gene ID: Rep_531_c_26_44
Type: TF
Location: 65690 - 66070 (-)
Gene ID: Rep_531_c_26_45
Type:
Location: 66067 - 66948 (-)
Gene ID: Rep_531_c_26_46
Type: TC
Location: 66962 - 67801 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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