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Cluster: Rep_531_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_531_c_12 Rep_531_c_12_35 46799 47569 - 3.A.1.27.4
TC Rep_531_c_12 Rep_531_c_12_36 47566 48309 - 3.A.1.27.2
TC Rep_531_c_12 Rep_531_c_12_37 48450 49268 + 1.B.42.1.2
pfam Rep_531_c_12 Rep_531_c_12_38 49372 50535 - SusE | SusF_SusE
TC Rep_531_c_12 Rep_531_c_12_39 50555 52222 - 8.A.46.1.1
TC Rep_531_c_12 Rep_531_c_12_40 52244 55261 - 1.B.14.6.1
CAZyme Rep_531_c_12 Rep_531_c_12_41 55345 57525 - GH97
CAZyme Rep_531_c_12 Rep_531_c_12_42 57702 59555 - GH13_46
Gene ID: Rep_531_c_12_35
Type: TC
Location: 46799 - 47569 (-)
Gene ID: Rep_531_c_12_36
Type: TC
Location: 47566 - 48309 (-)
Gene ID: Rep_531_c_12_37
Type: TC
Location: 48450 - 49268 (+)
Gene ID: Rep_531_c_12_38
Type: pfam
Location: 49372 - 50535 (-)
Gene ID: Rep_531_c_12_39
Type: TC
Location: 50555 - 52222 (-)
Gene ID: Rep_531_c_12_40
Type: TC
Location: 52244 - 55261 (-)
Gene ID: Rep_531_c_12_41
Type: CAZyme
Location: 55345 - 57525 (-)
Gene ID: Rep_531_c_12_42
Type: CAZyme
Location: 57702 - 59555 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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