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Cluster: Rep_531_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_531_c_11 Rep_531_c_11_53 66587 68635 + 3.A.16.1.1
pfam Rep_531_c_11 Rep_531_c_11_54 68648 69514 + CTP_transf_1
CAZyme Rep_531_c_11 Rep_531_c_11_55 69535 70686 - GT19
pfam Rep_531_c_11 Rep_531_c_11_56 70683 71453 - SurE
TC Rep_531_c_11 Rep_531_c_11_57 71671 72438 + 8.A.3.2.3
pfam Rep_531_c_11 Rep_531_c_11_58 72445 73341 + ParBc | HTH_ParB | ParB_dimer
pfam Rep_531_c_11 Rep_531_c_11_59 73354 74139 + DUF5683
CAZyme Rep_531_c_11 Rep_531_c_11_60 74143 75411 + GH23
STP Rep_531_c_11 Rep_531_c_11_61 75488 77767 + HD
TF Rep_531_c_11 Rep_531_c_11_62 77831 78178 - MerR
TC Rep_531_c_11 Rep_531_c_11_63 78194 79159 - 1.A.34.1.3
Gene ID: Rep_531_c_11_53
Type: TC
Location: 66587 - 68635 (+)
Gene ID: Rep_531_c_11_54
Type: pfam
Location: 68648 - 69514 (+)
Gene ID: Rep_531_c_11_55
Type: CAZyme
Location: 69535 - 70686 (-)
Gene ID: Rep_531_c_11_56
Type: pfam
Location: 70683 - 71453 (-)
Gene ID: Rep_531_c_11_57
Type: TC
Location: 71671 - 72438 (+)
Gene ID: Rep_531_c_11_58
Type: pfam
Location: 72445 - 73341 (+)
Gene ID: Rep_531_c_11_59
Type: pfam
Location: 73354 - 74139 (+)
Gene ID: Rep_531_c_11_60
Type: CAZyme
Location: 74143 - 75411 (+)
Gene ID: Rep_531_c_11_61
Type: STP
Location: 75488 - 77767 (+)
Gene ID: Rep_531_c_11_62
Type: TF
Location: 77831 - 78178 (-)
Gene ID: Rep_531_c_11_63
Type: TC
Location: 78194 - 79159 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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