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Cluster: Rep_531_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_531_c_4 Rep_531_c_4_40 37032 39671 - 1.B.14.6.14
pfam Rep_531_c_4 Rep_531_c_4_41 39887 41194 - Inos-1-P_synth | NAD_binding_5
STP Rep_531_c_4 Rep_531_c_4_42 41439 42344 + PfkB
TC Rep_531_c_4 Rep_531_c_4_43 42437 43207 - 3.A.1.7.2
TC Rep_531_c_4 Rep_531_c_4_44 43195 44064 - 3.A.1.7.1
TC Rep_531_c_4 Rep_531_c_4_45 44087 44944 - 3.A.1.7.1
TC Rep_531_c_4 Rep_531_c_4_46 44959 46017 - 3.A.1.7.1
NULL(UNKNOWN) Rep_531_c_4 Rep_531_c_4_47 46072 47067 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_531_c_4 Rep_531_c_4_48 47311 48849 - GH51_1
pfam Rep_531_c_4 Rep_531_c_4_49 49058 50083 + YceG
pfam Rep_531_c_4 Rep_531_c_4_50 50090 50779 - TrkA_N
TC Rep_531_c_4 Rep_531_c_4_51 50783 52612 - 2.A.38.4.3
Gene ID: Rep_531_c_4_40
Type: TC
Location: 37032 - 39671 (-)
Gene ID: Rep_531_c_4_41
Type: pfam
Location: 39887 - 41194 (-)
Gene ID: Rep_531_c_4_42
Type: STP
Location: 41439 - 42344 (+)
Gene ID: Rep_531_c_4_43
Type: TC
Location: 42437 - 43207 (-)
Gene ID: Rep_531_c_4_44
Type: TC
Location: 43195 - 44064 (-)
Gene ID: Rep_531_c_4_45
Type: TC
Location: 44087 - 44944 (-)
Gene ID: Rep_531_c_4_46
Type: TC
Location: 44959 - 46017 (-)
Gene ID: Rep_531_c_4_47
Type:
Location: 46072 - 47067 (-)
Gene ID: Rep_531_c_4_48
Type: CAZyme
Location: 47311 - 48849 (-)
Gene ID: Rep_531_c_4_49
Type: pfam
Location: 49058 - 50083 (+)
Gene ID: Rep_531_c_4_50
Type: pfam
Location: 50090 - 50779 (-)
Gene ID: Rep_531_c_4_51
Type: TC
Location: 50783 - 52612 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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