Cluster: Rep_500_CGC69
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_500
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_500_c_238 | Rep_500_c_238_13 | 19433 | 22462 | + | 1.B.14.6.1 |
| TC | Rep_500_c_238 | Rep_500_c_238_14 | 22485 | 24092 | + | 8.A.46.1.6 |
| CAZyme | Rep_500_c_238 | Rep_500_c_238_15 | 24103 | 25728 | + | GH30_4 |
| CAZyme | Rep_500_c_238 | Rep_500_c_238_16 | 25759 | 27348 | + | GH30_4 |
| pfam | Rep_500_c_238 | Rep_500_c_238_17 | 27663 | 28316 | - | Bac_DNA_binding | HU-HIG |
| TC | Rep_500_c_238 | Rep_500_c_238_18 | 28869 | 30482 | - | 9.B.174.1.1 |
Gene ID: Rep_500_c_238_13
Type: TC
Location: 19433 - 22462 (+)
Type: TC
Location: 19433 - 22462 (+)
Gene ID: Rep_500_c_238_14
Type: TC
Location: 22485 - 24092 (+)
Type: TC
Location: 22485 - 24092 (+)
Gene ID: Rep_500_c_238_15
Type: CAZyme
Location: 24103 - 25728 (+)
Type: CAZyme
Location: 24103 - 25728 (+)
Gene ID: Rep_500_c_238_16
Type: CAZyme
Location: 25759 - 27348 (+)
Type: CAZyme
Location: 25759 - 27348 (+)
Gene ID: Rep_500_c_238_17
Type: pfam
Location: 27663 - 28316 (-)
Type: pfam
Location: 27663 - 28316 (-)
Gene ID: Rep_500_c_238_18
Type: TC
Location: 28869 - 30482 (-)
Type: TC
Location: 28869 - 30482 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides congonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_500_c_238_14 | vegan > omnivore | 1.09610 | 0.00358 |
| Rep_500_c_238_14 | vegetarian > omnivore | 2.15420 | 0.03276 |