Cluster: Rep_500_CGC62
🧬 Cluster Details
- Gene Count: 18
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_500
- CGC Family ID: CGCFAM_05724
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_500_c_224 | Rep_500_c_224_7 | 7567 | 11043 | + | 1.B.14.6.2 |
| pfam | Rep_500_c_224 | Rep_500_c_224_8 | 11055 | 12530 | + | SusD_RagB | SusD-like_3 |
| pfam | Rep_500_c_224 | Rep_500_c_224_9 | 12530 | 15097 | + | Thioredoxin | AhpC-TSA | AhpC-TSA | Redoxin | Redoxin | Thioredoxin_8 | Thioredoxin_8 |
| CAZyme | Rep_500_c_224 | Rep_500_c_224_10 | 15166 | 17772 | + | CBM32 |
| STP | Rep_500_c_224 | Rep_500_c_224_11 | 17959 | 19302 | - | Pyr_redox_2 |
| pfam | Rep_500_c_224 | Rep_500_c_224_12 | 19331 | 19747 | - | bPH_4 |
| TC | Rep_500_c_224 | Rep_500_c_224_13 | 19854 | 21425 | + | 3.D.10.1.4 |
| pfam | Rep_500_c_224 | Rep_500_c_224_14 | 21495 | 22073 | - | Ferritin | Rubrerythrin | RUBY_RBDX |
| NULL(UNKNOWN) | Rep_500_c_224 | Rep_500_c_224_15 | 22176 | 22334 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_500_c_224 | Rep_500_c_224_16 | 22321 | 24000 | + | 2.A.53.3.9 |
| NULL(UNKNOWN) | Rep_500_c_224 | Rep_500_c_224_17 | 25108 | 27135 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_500_c_224 | Rep_500_c_224_18 | 27165 | 27638 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_500_c_224 | Rep_500_c_224_19 | 27651 | 28832 | - | GH88 |
| CAZyme | Rep_500_c_224 | Rep_500_c_224_20 | 28848 | 30779 | - | PL35 |
| CAZyme | Rep_500_c_224 | Rep_500_c_224_21 | 30804 | 32618 | - | PL35 |
| pfam | Rep_500_c_224 | Rep_500_c_224_22 | 32639 | 34450 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_500_c_224 | Rep_500_c_224_23 | 34480 | 37752 | - | 1.B.14.6.1 |
| CAZyme | Rep_500_c_224 | Rep_500_c_224_24 | 38019 | 39452 | + | CE20 |
Gene ID: Rep_500_c_224_7
Type: TC
Location: 7567 - 11043 (+)
Type: TC
Location: 7567 - 11043 (+)
Gene ID: Rep_500_c_224_8
Type: pfam
Location: 11055 - 12530 (+)
Type: pfam
Location: 11055 - 12530 (+)
Gene ID: Rep_500_c_224_9
Type: pfam
Location: 12530 - 15097 (+)
Type: pfam
Location: 12530 - 15097 (+)
Gene ID: Rep_500_c_224_10
Type: CAZyme
Location: 15166 - 17772 (+)
Type: CAZyme
Location: 15166 - 17772 (+)
Gene ID: Rep_500_c_224_11
Type: STP
Location: 17959 - 19302 (-)
Type: STP
Location: 17959 - 19302 (-)
Gene ID: Rep_500_c_224_12
Type: pfam
Location: 19331 - 19747 (-)
Type: pfam
Location: 19331 - 19747 (-)
Gene ID: Rep_500_c_224_13
Type: TC
Location: 19854 - 21425 (+)
Type: TC
Location: 19854 - 21425 (+)
Gene ID: Rep_500_c_224_14
Type: pfam
Location: 21495 - 22073 (-)
Type: pfam
Location: 21495 - 22073 (-)
Gene ID: Rep_500_c_224_15
Type:
Location: 22176 - 22334 (+)
Type:
Location: 22176 - 22334 (+)
Gene ID: Rep_500_c_224_16
Type: TC
Location: 22321 - 24000 (+)
Type: TC
Location: 22321 - 24000 (+)
Gene ID: Rep_500_c_224_17
Type:
Location: 25108 - 27135 (-)
Type:
Location: 25108 - 27135 (-)
Gene ID: Rep_500_c_224_18
Type:
Location: 27165 - 27638 (-)
Type:
Location: 27165 - 27638 (-)
Gene ID: Rep_500_c_224_19
Type: CAZyme
Location: 27651 - 28832 (-)
Type: CAZyme
Location: 27651 - 28832 (-)
Gene ID: Rep_500_c_224_20
Type: CAZyme
Location: 28848 - 30779 (-)
Type: CAZyme
Location: 28848 - 30779 (-)
Gene ID: Rep_500_c_224_21
Type: CAZyme
Location: 30804 - 32618 (-)
Type: CAZyme
Location: 30804 - 32618 (-)
Gene ID: Rep_500_c_224_22
Type: pfam
Location: 32639 - 34450 (-)
Type: pfam
Location: 32639 - 34450 (-)
Gene ID: Rep_500_c_224_23
Type: TC
Location: 34480 - 37752 (-)
Type: TC
Location: 34480 - 37752 (-)
Gene ID: Rep_500_c_224_24
Type: CAZyme
Location: 38019 - 39452 (+)
Type: CAZyme
Location: 38019 - 39452 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides congonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.