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Cluster: Rep_500_CGC60

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_500_c_219 Rep_500_c_219_39 58549 59139 - 9.B.171.1.2
sulfatase Rep_500_c_219 Rep_500_c_219_40 59618 61069 + S1_14
CAZyme Rep_500_c_219 Rep_500_c_219_41 61172 62443 - CE7
CAZyme Rep_500_c_219 Rep_500_c_219_42 62496 64265 - GH165
TC Rep_500_c_219 Rep_500_c_219_43 64272 65549 - 2.A.1.14.25
pfam Rep_500_c_219 Rep_500_c_219_44 65552 66157 - DUF386
pfam Rep_500_c_219 Rep_500_c_219_45 66154 67083 - DHDPS
CAZyme Rep_500_c_219 Rep_500_c_219_46 67111 68865 - GH165
pfam Rep_500_c_219 Rep_500_c_219_47 68892 70712 - SusD_RagB | SusD-like_3
TC Rep_500_c_219 Rep_500_c_219_48 70739 74050 - 1.B.14.6.1
Gene ID: Rep_500_c_219_39
Type: TC
Location: 58549 - 59139 (-)
Gene ID: Rep_500_c_219_40
Type: sulfatase
Location: 59618 - 61069 (+)
Gene ID: Rep_500_c_219_41
Type: CAZyme
Location: 61172 - 62443 (-)
Gene ID: Rep_500_c_219_42
Type: CAZyme
Location: 62496 - 64265 (-)
Gene ID: Rep_500_c_219_43
Type: TC
Location: 64272 - 65549 (-)
Gene ID: Rep_500_c_219_44
Type: pfam
Location: 65552 - 66157 (-)
Gene ID: Rep_500_c_219_45
Type: pfam
Location: 66154 - 67083 (-)
Gene ID: Rep_500_c_219_46
Type: CAZyme
Location: 67111 - 68865 (-)
Gene ID: Rep_500_c_219_47
Type: pfam
Location: 68892 - 70712 (-)
Gene ID: Rep_500_c_219_48
Type: TC
Location: 70739 - 74050 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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