Cluster: Rep_500_CGC54
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_500
- CGC Family ID: CGCFAM_05306
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_500_c_205 | Rep_500_c_205_65 | 98749 | 100488 | - | CE12 | CE8 |
| CAZyme | Rep_500_c_205 | Rep_500_c_205_66 | 101018 | 101962 | - | CE8 |
| CAZyme | Rep_500_c_205 | Rep_500_c_205_67 | 101999 | 103198 | - | GH105 |
| TC | Rep_500_c_205 | Rep_500_c_205_68 | 103501 | 104913 | + | 4.A.5.1.4 |
| pfam | Rep_500_c_205 | Rep_500_c_205_69 | 104977 | 105897 | + | KduI |
| NULL(UNKNOWN) | Rep_500_c_205 | Rep_500_c_205_70 | 105894 | 106088 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_500_c_205 | Rep_500_c_205_71 | 106202 | 107620 | + | 2.A.1.14.25 |
Gene ID: Rep_500_c_205_65
Type: CAZyme
Location: 98749 - 100488 (-)
Type: CAZyme
Location: 98749 - 100488 (-)
Gene ID: Rep_500_c_205_66
Type: CAZyme
Location: 101018 - 101962 (-)
Type: CAZyme
Location: 101018 - 101962 (-)
Gene ID: Rep_500_c_205_67
Type: CAZyme
Location: 101999 - 103198 (-)
Type: CAZyme
Location: 101999 - 103198 (-)
Gene ID: Rep_500_c_205_68
Type: TC
Location: 103501 - 104913 (+)
Type: TC
Location: 103501 - 104913 (+)
Gene ID: Rep_500_c_205_69
Type: pfam
Location: 104977 - 105897 (+)
Type: pfam
Location: 104977 - 105897 (+)
Gene ID: Rep_500_c_205_70
Type:
Location: 105894 - 106088 (-)
Type:
Location: 105894 - 106088 (-)
Gene ID: Rep_500_c_205_71
Type: TC
Location: 106202 - 107620 (+)
Type: TC
Location: 106202 - 107620 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides congonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.