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Cluster: Rep_500_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_500_c_205 Rep_500_c_205_50 73977 74777 - 9.B.116.3.2
TC Rep_500_c_205 Rep_500_c_205_51 75132 78380 + 1.B.14.6.1
pfam Rep_500_c_205 Rep_500_c_205_52 78406 80310 + SusD_RagB | SusD-like_3
pfam Rep_500_c_205 Rep_500_c_205_53 80329 82212 + DUF5123
CAZyme Rep_500_c_205 Rep_500_c_205_54 82287 83930 + CE8
CAZyme Rep_500_c_205 Rep_500_c_205_55 84024 85598 + PL1_2
CAZyme Rep_500_c_205 Rep_500_c_205_56 85632 87299 + PL1_2
CAZyme Rep_500_c_205 Rep_500_c_205_57 87335 88831 + PL1_2
Gene ID: Rep_500_c_205_50
Type: TC
Location: 73977 - 74777 (-)
Gene ID: Rep_500_c_205_51
Type: TC
Location: 75132 - 78380 (+)
Gene ID: Rep_500_c_205_52
Type: pfam
Location: 78406 - 80310 (+)
Gene ID: Rep_500_c_205_53
Type: pfam
Location: 80329 - 82212 (+)
Gene ID: Rep_500_c_205_54
Type: CAZyme
Location: 82287 - 83930 (+)
Gene ID: Rep_500_c_205_55
Type: CAZyme
Location: 84024 - 85598 (+)
Gene ID: Rep_500_c_205_56
Type: CAZyme
Location: 85632 - 87299 (+)
Gene ID: Rep_500_c_205_57
Type: CAZyme
Location: 87335 - 88831 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_500_c_205_51 vegetarian > omnivore 2.12479 0.02280
Rep_500_c_205_56 vegan > omnivore 1.12053 0.00358
Rep_500_c_205_56 vegetarian > omnivore 1.08885 0.03529

🧭 Explore Read Mapping of CGC

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