dbCAN HGM

Cluster: Rep_500_CGC52

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_500_c_205	Rep_500_c_205_40	54912	56489	-	GH28
CAZyme	Rep_500_c_205	Rep_500_c_205_41	56517	58931	-	CE8
pfam	Rep_500_c_205	Rep_500_c_205_42	58973	60826	-	Mfa_like_1
pfam	Rep_500_c_205	Rep_500_c_205_43	60890	62542	-	DUF5123
TC	Rep_500_c_205	Rep_500_c_205_44	62563	64464	-	8.A.46.1.3
TC	Rep_500_c_205	Rep_500_c_205_45	64489	67701	-	1.B.14.6.1
CAZyme	Rep_500_c_205	Rep_500_c_205_46	67746	70139	-	PL1_2

Gene ID: Rep_500_c_205_40
Type: CAZyme
Location: 54912 - 56489 (-)

Gene ID: Rep_500_c_205_41
Type: CAZyme
Location: 56517 - 58931 (-)

Gene ID: Rep_500_c_205_42
Type: pfam
Location: 58973 - 60826 (-)

Gene ID: Rep_500_c_205_43
Type: pfam
Location: 60890 - 62542 (-)

Gene ID: Rep_500_c_205_44
Type: TC
Location: 62563 - 64464 (-)

Gene ID: Rep_500_c_205_45
Type: TC
Location: 64489 - 67701 (-)

Gene ID: Rep_500_c_205_46
Type: CAZyme
Location: 67746 - 70139 (-)

Taxonomic Lineage

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Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_500_c_205_41	vegan > omnivore	1.72099	0.00358
Rep_500_c_205_42	vegan > omnivore	1.68388	0.00358
Rep_500_c_205_43	vegan > omnivore	1.57591	0.00358
Rep_500_c_205_44	vegan > omnivore	1.44472	0.00358
Rep_500_c_205_45	vegan > omnivore	2.04575	0.00358
Rep_500_c_205_46	vegan > omnivore	2.33156	0.00189