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Cluster: Rep_500_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_500_c_77 Rep_500_c_77_1 3 1103 + GH105
TC Rep_500_c_77 Rep_500_c_77_2 1133 4237 + 1.B.14.6.1
pfam Rep_500_c_77 Rep_500_c_77_3 4260 6110 + SusD_RagB | SusD-like_3
CAZyme Rep_500_c_77 Rep_500_c_77_4 6179 7417 + GH154
pfam Rep_500_c_77 Rep_500_c_77_5 7500 8474 + Metallophos
sulfatase Rep_500_c_77 Rep_500_c_77_6 8504 9934 + S1_7
CAZyme Rep_500_c_77 Rep_500_c_77_7 9952 11160 + GH88
CAZyme Rep_500_c_77 Rep_500_c_77_8 11175 15809 + GH106 | GH43_26
CAZyme Rep_500_c_77 Rep_500_c_77_9 15821 17788 + GH146
CAZyme Rep_500_c_77 Rep_500_c_77_10 17834 19873 + GH182
Gene ID: Rep_500_c_77_1
Type: CAZyme
Location: 3 - 1103 (+)
Gene ID: Rep_500_c_77_2
Type: TC
Location: 1133 - 4237 (+)
Gene ID: Rep_500_c_77_3
Type: pfam
Location: 4260 - 6110 (+)
Gene ID: Rep_500_c_77_4
Type: CAZyme
Location: 6179 - 7417 (+)
Gene ID: Rep_500_c_77_5
Type: pfam
Location: 7500 - 8474 (+)
Gene ID: Rep_500_c_77_6
Type: sulfatase
Location: 8504 - 9934 (+)
Gene ID: Rep_500_c_77_7
Type: CAZyme
Location: 9952 - 11160 (+)
Gene ID: Rep_500_c_77_8
Type: CAZyme
Location: 11175 - 15809 (+)
Gene ID: Rep_500_c_77_9
Type: CAZyme
Location: 15821 - 17788 (+)
Gene ID: Rep_500_c_77_10
Type: CAZyme
Location: 17834 - 19873 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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