dbCAN Logo

Cluster: Rep_500_CGC106

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_500_c_341 Rep_500_c_341_4 2580 3896 + 2.A.1.7.5
TF Rep_500_c_341 Rep_500_c_341_5 4088 4645 + GerE
STP Rep_500_c_341 Rep_500_c_341_6 4701 5687 + FecR
TC Rep_500_c_341 Rep_500_c_341_7 5885 9238 + 1.B.14.6.13
TC Rep_500_c_341 Rep_500_c_341_8 9252 10844 + 8.A.46.2.2
pfam Rep_500_c_341 Rep_500_c_341_9 10875 11831 + GH18_BT1044-like
CAZyme Rep_500_c_341 Rep_500_c_341_10 11898 13553 + GH18
CAZyme Rep_500_c_341 Rep_500_c_341_11 13662 14594 + GH18
Gene ID: Rep_500_c_341_4
Type: TC
Location: 2580 - 3896 (+)
Gene ID: Rep_500_c_341_5
Type: TF
Location: 4088 - 4645 (+)
Gene ID: Rep_500_c_341_6
Type: STP
Location: 4701 - 5687 (+)
Gene ID: Rep_500_c_341_7
Type: TC
Location: 5885 - 9238 (+)
Gene ID: Rep_500_c_341_8
Type: TC
Location: 9252 - 10844 (+)
Gene ID: Rep_500_c_341_9
Type: pfam
Location: 10875 - 11831 (+)
Gene ID: Rep_500_c_341_10
Type: CAZyme
Location: 11898 - 13553 (+)
Gene ID: Rep_500_c_341_11
Type: CAZyme
Location: 13662 - 14594 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List