Cluster: Rep_500_CGC105
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_500
- CGC Family ID: CGCFAM_05722
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_500_c_334 | Rep_500_c_334_14 | 14434 | 15507 | + | GH16_3 |
| TC | Rep_500_c_334 | Rep_500_c_334_15 | 15598 | 18738 | + | 1.B.14.6.2 |
| TC | Rep_500_c_334 | Rep_500_c_334_16 | 18755 | 20338 | + | 8.A.46.2.2 |
| CAZyme | Rep_500_c_334 | Rep_500_c_334_17 | 20403 | 21737 | + | GH18 |
| pfam | Rep_500_c_334 | Rep_500_c_334_18 | 21759 | 22880 | + | HGSNAT_cat |
| TC | Rep_500_c_334 | Rep_500_c_334_19 | 22893 | 24221 | + | 2.A.1.7.9 |
| CAZyme | Rep_500_c_334 | Rep_500_c_334_20 | 24197 | 25381 | + | CE9 |
| pfam | Rep_500_c_334 | Rep_500_c_334_21 | 25389 | 26174 | + | Glucosamine_iso |
| CAZyme | Rep_500_c_334 | Rep_500_c_334_22 | 26185 | 27738 | + | GH20 |
| pfam | Rep_500_c_334 | Rep_500_c_334_23 | 27744 | 28277 | + | Glyco_hydro_20b |
| CAZyme | Rep_500_c_334 | Rep_500_c_334_24 | 28292 | 29374 | + | GH20 |
| TC | Rep_500_c_334 | Rep_500_c_334_25 | 29744 | 32899 | + | 1.B.14.6.1 |
| TC | Rep_500_c_334 | Rep_500_c_334_26 | 32913 | 34322 | + | 8.A.46.1.4 |
| pfam | Rep_500_c_334 | Rep_500_c_334_27 | 34344 | 34946 | + | Fasciclin |
| NULL(UNKNOWN) | Rep_500_c_334 | Rep_500_c_334_28 | 34964 | 36820 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_500_c_334 | Rep_500_c_334_29 | 36898 | 38202 | + | 2.A.1.7.9 |
| CAZyme | Rep_500_c_334 | Rep_500_c_334_30 | 38199 | 39383 | + | CE9 |
| pfam | Rep_500_c_334 | Rep_500_c_334_31 | 39401 | 40159 | + | Glucosamine_iso |
| CAZyme | Rep_500_c_334 | Rep_500_c_334_32 | 40166 | 42526 | + | GH20 |
Gene ID: Rep_500_c_334_14
Type: CAZyme
Location: 14434 - 15507 (+)
Type: CAZyme
Location: 14434 - 15507 (+)
Gene ID: Rep_500_c_334_15
Type: TC
Location: 15598 - 18738 (+)
Type: TC
Location: 15598 - 18738 (+)
Gene ID: Rep_500_c_334_16
Type: TC
Location: 18755 - 20338 (+)
Type: TC
Location: 18755 - 20338 (+)
Gene ID: Rep_500_c_334_17
Type: CAZyme
Location: 20403 - 21737 (+)
Type: CAZyme
Location: 20403 - 21737 (+)
Gene ID: Rep_500_c_334_18
Type: pfam
Location: 21759 - 22880 (+)
Type: pfam
Location: 21759 - 22880 (+)
Gene ID: Rep_500_c_334_19
Type: TC
Location: 22893 - 24221 (+)
Type: TC
Location: 22893 - 24221 (+)
Gene ID: Rep_500_c_334_20
Type: CAZyme
Location: 24197 - 25381 (+)
Type: CAZyme
Location: 24197 - 25381 (+)
Gene ID: Rep_500_c_334_21
Type: pfam
Location: 25389 - 26174 (+)
Type: pfam
Location: 25389 - 26174 (+)
Gene ID: Rep_500_c_334_22
Type: CAZyme
Location: 26185 - 27738 (+)
Type: CAZyme
Location: 26185 - 27738 (+)
Gene ID: Rep_500_c_334_23
Type: pfam
Location: 27744 - 28277 (+)
Type: pfam
Location: 27744 - 28277 (+)
Gene ID: Rep_500_c_334_24
Type: CAZyme
Location: 28292 - 29374 (+)
Type: CAZyme
Location: 28292 - 29374 (+)
Gene ID: Rep_500_c_334_25
Type: TC
Location: 29744 - 32899 (+)
Type: TC
Location: 29744 - 32899 (+)
Gene ID: Rep_500_c_334_26
Type: TC
Location: 32913 - 34322 (+)
Type: TC
Location: 32913 - 34322 (+)
Gene ID: Rep_500_c_334_27
Type: pfam
Location: 34344 - 34946 (+)
Type: pfam
Location: 34344 - 34946 (+)
Gene ID: Rep_500_c_334_28
Type:
Location: 34964 - 36820 (+)
Type:
Location: 34964 - 36820 (+)
Gene ID: Rep_500_c_334_29
Type: TC
Location: 36898 - 38202 (+)
Type: TC
Location: 36898 - 38202 (+)
Gene ID: Rep_500_c_334_30
Type: CAZyme
Location: 38199 - 39383 (+)
Type: CAZyme
Location: 38199 - 39383 (+)
Gene ID: Rep_500_c_334_31
Type: pfam
Location: 39401 - 40159 (+)
Type: pfam
Location: 39401 - 40159 (+)
Gene ID: Rep_500_c_334_32
Type: CAZyme
Location: 40166 - 42526 (+)
Type: CAZyme
Location: 40166 - 42526 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides congonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.