Cluster: Rep_490_CGC32
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 5
- Substrate:
- Genome ID: Rep_490
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1825 | 2351470 | 2355354 | + | GH31_18 |
| pfam | Rep_490_c_2 | Rep_490_c_2_1826 | 2355565 | 2356326 | + | CarboxypepD_reg |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1827 | 2356448 | 2357881 | - | CE20 |
| TF | Rep_490_c_2 | Rep_490_c_2_1828 | 2358064 | 2361996 | - | HTH_AraC |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1829 | 2362121 | 2364568 | - | GH95 |
| NULL(UNKNOWN) | Rep_490_c_2 | Rep_490_c_2_1830 | 2364877 | 2365050 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_490_c_2 | Rep_490_c_2_1831 | 2365177 | 2368497 | + | 1.B.14.6.1 |
| TC | Rep_490_c_2 | Rep_490_c_2_1832 | 2368547 | 2370379 | + | 8.A.46.1.3 |
| sulfatase | Rep_490_c_2 | Rep_490_c_2_1833 | 2370407 | 2372278 | + | S1_16 |
| sulfatase | Rep_490_c_2 | Rep_490_c_2_1834 | 2372361 | 2373929 | + | S1_11 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1835 | 2373947 | 2376271 | + | GH20 |
| CAZyme | Rep_490_c_2 | Rep_490_c_2_1836 | 2376307 | 2379342 | + | GH2 |
| NULL(UNKNOWN) | Rep_490_c_2 | Rep_490_c_2_1837 | 2379377 | 2380507 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_490_c_2 | Rep_490_c_2_1838 | 2380603 | 2382282 | - | 2.A.53.3.9 |
| pfam | Rep_490_c_2 | Rep_490_c_2_1839 | 2382527 | 2383105 | + | Ferritin | Rubrerythrin | RUBY_RBDX |
| pfam | Rep_490_c_2 | Rep_490_c_2_1840 | 2383183 | 2383455 | - | DUF4884 |
| TC | Rep_490_c_2 | Rep_490_c_2_1841 | 2383458 | 2385029 | - | 3.D.10.1.4 |
Gene ID: Rep_490_c_2_1825
Type: CAZyme
Location: 2351470 - 2355354 (+)
Type: CAZyme
Location: 2351470 - 2355354 (+)
Gene ID: Rep_490_c_2_1826
Type: pfam
Location: 2355565 - 2356326 (+)
Type: pfam
Location: 2355565 - 2356326 (+)
Gene ID: Rep_490_c_2_1827
Type: CAZyme
Location: 2356448 - 2357881 (-)
Type: CAZyme
Location: 2356448 - 2357881 (-)
Gene ID: Rep_490_c_2_1828
Type: TF
Location: 2358064 - 2361996 (-)
Type: TF
Location: 2358064 - 2361996 (-)
Gene ID: Rep_490_c_2_1829
Type: CAZyme
Location: 2362121 - 2364568 (-)
Type: CAZyme
Location: 2362121 - 2364568 (-)
Gene ID: Rep_490_c_2_1830
Type:
Location: 2364877 - 2365050 (+)
Type:
Location: 2364877 - 2365050 (+)
Gene ID: Rep_490_c_2_1831
Type: TC
Location: 2365177 - 2368497 (+)
Type: TC
Location: 2365177 - 2368497 (+)
Gene ID: Rep_490_c_2_1832
Type: TC
Location: 2368547 - 2370379 (+)
Type: TC
Location: 2368547 - 2370379 (+)
Gene ID: Rep_490_c_2_1833
Type: sulfatase
Location: 2370407 - 2372278 (+)
Type: sulfatase
Location: 2370407 - 2372278 (+)
Gene ID: Rep_490_c_2_1834
Type: sulfatase
Location: 2372361 - 2373929 (+)
Type: sulfatase
Location: 2372361 - 2373929 (+)
Gene ID: Rep_490_c_2_1835
Type: CAZyme
Location: 2373947 - 2376271 (+)
Type: CAZyme
Location: 2373947 - 2376271 (+)
Gene ID: Rep_490_c_2_1836
Type: CAZyme
Location: 2376307 - 2379342 (+)
Type: CAZyme
Location: 2376307 - 2379342 (+)
Gene ID: Rep_490_c_2_1837
Type:
Location: 2379377 - 2380507 (+)
Type:
Location: 2379377 - 2380507 (+)
Gene ID: Rep_490_c_2_1838
Type: TC
Location: 2380603 - 2382282 (-)
Type: TC
Location: 2380603 - 2382282 (-)
Gene ID: Rep_490_c_2_1839
Type: pfam
Location: 2382527 - 2383105 (+)
Type: pfam
Location: 2382527 - 2383105 (+)
Gene ID: Rep_490_c_2_1840
Type: pfam
Location: 2383183 - 2383455 (-)
Type: pfam
Location: 2383183 - 2383455 (-)
Gene ID: Rep_490_c_2_1841
Type: TC
Location: 2383458 - 2385029 (-)
Type: TC
Location: 2383458 - 2385029 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides thetaiotaomicron
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_490_c_2_1831 | vegetarian > omnivore | 1.06873 | 0.04671 |