PROTEIN: Rep_490_c_2_1837
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Protein File & Metadata
Source:
Rep_490_c_2_1837.pdb
Genome ID:
Protein ID:
Rep_490_c_2_1837
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Protein Sequence
MNKLSEKNTT RLASLDILRG FDLFLLVFFQ PVFAALARQL NLPFLNDILY QFDHEVWEGF 60 RFWDLVMPLF LFMTGASMPF SLSKYVGMSG SYWLVYRRIL RRVFLLFIFG MIVQGNLLGL 120 DSSHIYLYSN TLQSIAVGYL IAAVIQLHFS FRWQIGITLL LLFIYWIPMT FLGDFTPAGN 180 FAEQVDRCVL GRFRDGVFWN EDGTWSFSPY YNYTWIWSSL TFGVTVMLGA FAGKIMKEGK 240 ANRKKVVQTL SVIGVLLVGL AMLWSLQMPI IKRLWTGSMT LLSGGYCFLL MALFYYWIDY 300 KGHSRGLNWL KVYGMNSITA YLLGEVVNFR CIADSVSYGL KQYIGDYYPV WLTFTNYLIL 360 FFLLRMMYKR GLFLKV 376
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q55C73-F1-model_v4 | 1 | 376 | 16 | 426 | 0.7739 |
0.835 |
| AF-I1NBX1-F1-model_v4 | 1 | 376 | 18 | 464 | 0.7577 |
0.8476 |
| AF-K7KGM5-F1-model_v4 | 2 | 376 | 20 | 465 | 0.7522 |
0.8444 |
| AF-A0A368UJV1-F1-model_v4 | 5 | 376 | 12 | 455 | 0.7519 |
0.8428 |
| AF-Q94CC1-F1-model_v4 | 1 | 376 | 9 | 472 | 0.7462 |
0.841 |
| AF-Q5JK28-F1-model_v4 | 1 | 376 | 42 | 488 | 0.7418 |
0.8469 |
| AF-I1K6Y3-F1-model_v4 | 5 | 352 | 15 | 413 | 0.7414 |
0.8497 |
| AF-B4FES9-F1-model_v4 | 1 | 376 | 22 | 484 | 0.7397 |
0.8423 |
| AF-Q5WMX9-F1-model_v4 | 1 | 376 | 26 | 491 | 0.7384 |
0.8455 |
| AF-K7LGV3-F1-model_v4 | 5 | 376 | 48 | 489 | 0.7343 |
0.8478 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| CDF60354.1 | GH89 | 1 | 376 | 443 | 1227 | 0.546 |
0.8392 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| CDF60354.1 | GH89 | 1 | 376 | 443 | 1227 | 0.546 |
0.8392 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q6CK18-F1-model_v4 | 5 | 376 | 109 | 446 | 0.6786 |
0.8262 |
| AF-Q9UTL4-F1-model_v4 | 5 | 376 | 113 | 459 | 0.6643 |
0.8004 |
| AF-Q3UDW8-F1-model_v4 | 1 | 376 | 249 | 656 | 0.6531 |
0.836 |
| AF-Q6BTT3-F1-model_v4 | 5 | 376 | 113 | 493 | 0.6508 |
0.7578 |
| AF-Q68CP4-F1-model_v4 | 2 | 376 | 258 | 663 | 0.6482 |
0.8349 |