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Cluster: Rep_461_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_461_c_13 Rep_461_c_13_41 55689 56648 + GT2
NULL(UNKNOWN) Rep_461_c_13 Rep_461_c_13_42 56652 57893 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_461_c_13 Rep_461_c_13_43 57896 58720 + GT2
pfam Rep_461_c_13 Rep_461_c_13_44 58717 59472 + YjbH
pfam Rep_461_c_13 Rep_461_c_13_45 59489 60709 + Aminotran_1_2 | DegT_DnrJ_EryC1 | DegT_DnrJ_EryC1
TC Rep_461_c_13 Rep_461_c_13_46 60706 61296 + 9.B.18.1.3
STP Rep_461_c_13 Rep_461_c_13_47 61415 62734 - ATPase_2
TC Rep_461_c_13 Rep_461_c_13_48 62851 64248 - 2.A.1.3.17
Gene ID: Rep_461_c_13_41
Type: CAZyme
Location: 55689 - 56648 (+)
Gene ID: Rep_461_c_13_42
Type:
Location: 56652 - 57893 (+)
Gene ID: Rep_461_c_13_43
Type: CAZyme
Location: 57896 - 58720 (+)
Gene ID: Rep_461_c_13_44
Type: pfam
Location: 58717 - 59472 (+)
Gene ID: Rep_461_c_13_45
Type: pfam
Location: 59489 - 60709 (+)
Gene ID: Rep_461_c_13_46
Type: TC
Location: 60706 - 61296 (+)
Gene ID: Rep_461_c_13_47
Type: STP
Location: 61415 - 62734 (-)
Gene ID: Rep_461_c_13_48
Type: TC
Location: 62851 - 64248 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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