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PROTEIN: Rep_461_c_13_42

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Protein File & Metadata
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Source:
Rep_461_c_13_42.pdb
Genome ID:
Rep_461
Protein ID:
Rep_461_c_13_42

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Detailed structural information will appear here after analysis...

Protein Sequence 
MLIEQLINNQ   LNNFPTIKKV   VKRGYQLLMY   LISPKTKSLG   NIVRISPNDG   SEYFFGYYDK 60
SPWDALGKYM   LCMKAKNTWS   EVAPLVPVDL   LLIDIRSNNF   VKKIGNSHSW   NVQQGCMLQW 120
LGPHFDKQVI   YNDFREGHFC   SIILSVESGE   ERVIDCPVYS   VSIDGTTALS   LDFTRLHRLR 180
KGYGYANLDE   MTKDKKLPDD   TCIWKIDLKS   GTIIPLLKYE   DFVSFEFRKE   MEGAEHKVNH 240
LMISPNGKRF   MVLHRWFNNH   RKYSRLVTCN   MDGTEMYNLS   DDDMVSHCYW   KNDEEILAFE 300
NKHGSGPGYY   LMKDKTREYK   HLWKELCVDG   HPSYSPDGKL   VVTDSYPDRT   RIASIRIMRD 360
NQIEVVARVF   APFRYDNDTR   CDLHPRWSRD   GTKICFDAAF   EGHRGLYVVD   INA 413
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H3GXZ1-F1-model_v4 35 413 16 384 0.7263 0.8015
AF-Q54MT0-F1-model_v4 40 413 1 314 0.6639 0.7895
AF-Q60EF6-F1-model_v4 40 413 1 319 0.6603 0.7695
AF-Q7ZV55-F1-model_v4 41 413 1 316 0.6564 0.7708
AF-F4II66-F1-model_v4 35 413 5 348 0.6464 0.7335
AF-Q383W8-F1-model_v4 39 413 2 325 0.6423 0.7554
AF-A4ID08-F1-model_v4 39 413 5 343 0.6354 0.7309
AF-F6NI92-F1-model_v4 39 413 4 339 0.6322 0.7168
AF-X8FIN3-F1-model_v4 38 413 20 366 0.6277 0.7404
AF-O53405-F1-model_v4 38 413 21 361 0.6241 0.7452
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
UOX92232.1 PL0 42 412 1 323 0.7453 0.8496
UQZ81419.1 PL22_1 35 411 16 372 0.7442 0.8283
AF-L0LZ37-F1-model_v4 PL22_1 36 411 16 371 0.7437 0.8285
A0A1V4HJK9 PL22 36 413 9 363 0.7414 0.8214
AF-A0A6B8N4I5-F1-model_v4 PL22_1 36 411 16 375 0.7403 0.8202
AF-A0A7I6RVE2-F1-model_v4 PL22_1 36 411 16 375 0.7401 0.8201
AF-A0A7I6Q566-F1-model_v4 PL22_1 36 411 16 375 0.7398 0.8198
AF-A0A6G9RIJ8-F1-model_v4 PL22_1 36 411 16 375 0.7394 0.8193
AF-A0A3S5XTL1-F1-model_v4 PL22_1 36 411 16 375 0.7393 0.8191
AF-A0A7I6T0X5-F1-model_v4 PL22_1 36 411 16 375 0.7392 0.8191
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
UQZ81419.1 PL22_1 35 411 16 372 0.7442 0.8283
A0A7G8UEZ0 PL22 36 412 11 350 0.7435 0.8403
A0A1V4HJK9 PL22 36 413 9 363 0.7414 0.8214
W9BCH0 PL22_1 35 413 16 384 0.727 0.8023
A0A378GMG0 PL22_1 36 413 17 383 0.7269 0.8067
A0A8J8SII2 PL22 35 413 24 394 0.725 0.8092
BCS37116.1 PL22 36 413 25 349 0.7231 0.8545
ULL16901.1 PL22 36 413 19 353 0.7161 0.8334
QYY37402.1 PL22 36 413 10 359 0.7149 0.8092
A0A127F489 PL22 37 413 16 364 0.7138 0.8034
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3pe7-assembly1.cif.gz_A 35 413 16 372 0.7401 0.8283
3c5m-assembly3.cif.gz_C 35 413 15 373 0.7347 0.8175
3c5m-assembly2.cif.gz_B 35 413 15 375 0.7333 0.8137
4bh6-assembly2.cif.gz_H 39 413 2 299 0.6836 0.8104
4pxw-assembly1.cif.gz_A 39 411 1 292 0.6822 0.814
8f8e-assembly1.cif.gz_A 39 412 1 293 0.6821 0.8131
2gop-assembly1.cif.gz_B 49 413 1 295 0.676 0.815
6qdv-assembly1.cif.gz_N 41 412 7 306 0.6618 0.79
8p5d-assembly1.cif.gz_SGG 39 413 3 319 0.6596 0.7643
2gop-assembly1.cif.gz_A 49 413 4 306 0.6572 0.7938
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P21258-F1-model_v4 35 413 16 384 0.7291 0.8029
AF-Q59418-F1-model_v4 35 413 16 384 0.729 0.8025
AF-B5FZ19-F1-model_v4 40 413 1 316 0.6591 0.7737
AF-Q7ZV55-F1-model_v4 41 413 1 316 0.6564 0.7708
AF-Q13347-F1-model_v4 41 413 1 316 0.6558 0.7701
AF-Q2UQ34-F1-model_v4 41 413 1 319 0.6545 0.7725
AF-Q0CXH9-F1-model_v4 41 413 1 320 0.6535 0.7702
AF-Q5IH81-F1-model_v4 41 413 1 316 0.652 0.7743
AF-A1D7I5-F1-model_v4 40 413 1 324 0.6509 0.7628
AF-A7TH19-F1-model_v4 40 413 1 323 0.6492 0.7702
Download Full SwissProt Results