Cluster: Rep_456_CGC98
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 6
- Substrate: beta-mannan
- Genome ID: Rep_456
- CGC Family ID: CGCFAM_00722
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_456_c_69 | Rep_456_c_69_1 | 435 | 2687 | + | GH3 |
| CAZyme | Rep_456_c_69 | Rep_456_c_69_2 | 2697 | 5294 | + | GH2 |
| CAZyme | Rep_456_c_69 | Rep_456_c_69_3 | 5392 | 6549 | - | GH26 |
| CAZyme | Rep_456_c_69 | Rep_456_c_69_4 | 6575 | 8056 | - | GH173 |
| CAZyme | Rep_456_c_69 | Rep_456_c_69_5 | 8084 | 9541 | - | GH173 |
| NULL(UNKNOWN) | Rep_456_c_69 | Rep_456_c_69_6 | 9550 | 10512 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_456_c_69 | Rep_456_c_69_7 | 10527 | 12035 | - | 8.A.46.1.4 |
| TC | Rep_456_c_69 | Rep_456_c_69_8 | 12050 | 15157 | - | 1.B.14.6.1 |
| CAZyme | Rep_456_c_69 | Rep_456_c_69_9 | 15405 | 16436 | - | GH130_5 |
| TC | Rep_456_c_69 | Rep_456_c_69_10 | 16466 | 18043 | - | 2.A.21.3.19 |
Gene ID: Rep_456_c_69_1
Type: CAZyme
Location: 435 - 2687 (+)
Type: CAZyme
Location: 435 - 2687 (+)
Gene ID: Rep_456_c_69_2
Type: CAZyme
Location: 2697 - 5294 (+)
Type: CAZyme
Location: 2697 - 5294 (+)
Gene ID: Rep_456_c_69_3
Type: CAZyme
Location: 5392 - 6549 (-)
Type: CAZyme
Location: 5392 - 6549 (-)
Gene ID: Rep_456_c_69_4
Type: CAZyme
Location: 6575 - 8056 (-)
Type: CAZyme
Location: 6575 - 8056 (-)
Gene ID: Rep_456_c_69_5
Type: CAZyme
Location: 8084 - 9541 (-)
Type: CAZyme
Location: 8084 - 9541 (-)
Gene ID: Rep_456_c_69_6
Type:
Location: 9550 - 10512 (-)
Type:
Location: 9550 - 10512 (-)
Gene ID: Rep_456_c_69_7
Type: TC
Location: 10527 - 12035 (-)
Type: TC
Location: 10527 - 12035 (-)
Gene ID: Rep_456_c_69_8
Type: TC
Location: 12050 - 15157 (-)
Type: TC
Location: 12050 - 15157 (-)
Gene ID: Rep_456_c_69_9
Type: CAZyme
Location: 15405 - 16436 (-)
Type: CAZyme
Location: 15405 - 16436 (-)
Gene ID: Rep_456_c_69_10
Type: TC
Location: 16466 - 18043 (-)
Type: TC
Location: 16466 - 18043 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900759525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_456_c_69_1 | vegan > omnivore | 2.18856 | 0.02809 |
| Rep_456_c_69_1 | vegetarian > omnivore | 2.74119 | 0.00065 |
| Rep_456_c_69_2 | vegan > omnivore | 1.01884 | 0.02547 |
| Rep_456_c_69_2 | vegetarian > omnivore | 1.43674 | 0.00065 |
| Rep_456_c_69_3 | vegan > omnivore | 1.24767 | 0.02809 |
| Rep_456_c_69_3 | vegetarian > omnivore | 1.85964 | 0.00065 |
| Rep_456_c_69_4 | vegetarian > omnivore | 1.01343 | 0.00065 |
| Rep_456_c_69_5 | vegan > omnivore | 2.28546 | 0.02809 |
| Rep_456_c_69_5 | vegetarian > omnivore | 2.51319 | 0.00065 |
| Rep_456_c_69_6 | vegan > omnivore | 1.12453 | 0.02809 |
| Rep_456_c_69_6 | vegetarian > omnivore | 1.01928 | 0.00065 |
| Rep_456_c_69_7 | vegetarian > omnivore | 1.70962 | 0.00065 |
| Rep_456_c_69_7 | vegan > omnivore | 1.70539 | 0.02809 |
| Rep_456_c_69_8 | vegetarian > omnivore | 1.71122 | 0.00065 |
| Rep_456_c_69_8 | vegan > omnivore | 1.46756 | 0.02809 |
| Rep_456_c_69_9 | vegan > omnivore | 1.56667 | 0.02809 |
| Rep_456_c_69_9 | vegetarian > omnivore | 1.79970 | 0.00065 |
| Rep_456_c_69_10 | vegetarian > omnivore | 1.92643 | 0.00065 |
| Rep_456_c_69_10 | vegan > omnivore | 1.29574 | 0.02809 |