Cluster: Rep_456_CGC92
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_456
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_456_c_57 | Rep_456_c_57_6 | 5942 | 6766 | + | GT5 |
| pfam | Rep_456_c_57 | Rep_456_c_57_7 | 6787 | 8310 | + | DUF4270 |
| CAZyme | Rep_456_c_57 | Rep_456_c_57_8 | 8410 | 9828 | - | GH57 |
| CAZyme | Rep_456_c_57 | Rep_456_c_57_9 | 9847 | 11118 | - | GT4 |
| CAZyme | Rep_456_c_57 | Rep_456_c_57_10 | 11133 | 13073 | - | GH133 |
| NULL(UNKNOWN) | Rep_456_c_57 | Rep_456_c_57_11 | 13078 | 13230 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_456_c_57 | Rep_456_c_57_12 | 13264 | 13965 | + | 9.B.104.3.2 |
| TC | Rep_456_c_57 | Rep_456_c_57_13 | 13960 | 14586 | - | 2.A.124.1.4 |
Gene ID: Rep_456_c_57_6
Type: CAZyme
Location: 5942 - 6766 (+)
Type: CAZyme
Location: 5942 - 6766 (+)
Gene ID: Rep_456_c_57_7
Type: pfam
Location: 6787 - 8310 (+)
Type: pfam
Location: 6787 - 8310 (+)
Gene ID: Rep_456_c_57_8
Type: CAZyme
Location: 8410 - 9828 (-)
Type: CAZyme
Location: 8410 - 9828 (-)
Gene ID: Rep_456_c_57_9
Type: CAZyme
Location: 9847 - 11118 (-)
Type: CAZyme
Location: 9847 - 11118 (-)
Gene ID: Rep_456_c_57_10
Type: CAZyme
Location: 11133 - 13073 (-)
Type: CAZyme
Location: 11133 - 13073 (-)
Gene ID: Rep_456_c_57_11
Type:
Location: 13078 - 13230 (+)
Type:
Location: 13078 - 13230 (+)
Gene ID: Rep_456_c_57_12
Type: TC
Location: 13264 - 13965 (+)
Type: TC
Location: 13264 - 13965 (+)
Gene ID: Rep_456_c_57_13
Type: TC
Location: 13960 - 14586 (-)
Type: TC
Location: 13960 - 14586 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900759525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_456_c_57_7 | vegan > omnivore | 1.78837 | 0.02809 |
| Rep_456_c_57_7 | vegetarian > omnivore | 1.48410 | 0.00065 |
| Rep_456_c_57_9 | vegetarian > omnivore | 1.06742 | 0.00065 |
| Rep_456_c_57_12 | vegan > omnivore | 1.11236 | 0.02809 |
| Rep_456_c_57_12 | vegetarian > omnivore | 1.09813 | 0.00065 |
| Rep_456_c_57_13 | vegan > omnivore | 2.51732 | 0.01529 |
| Rep_456_c_57_13 | vegetarian > omnivore | 1.96668 | 0.00065 |