dbCAN Logo

Cluster: Rep_456_CGC82

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_456_c_45 Rep_456_c_45_15 17476 18645 - PL13
sulfatase Rep_456_c_45 Rep_456_c_45_16 18709 20670 - S1_8
CAZyme Rep_456_c_45 Rep_456_c_45_17 20918 22816 + PL37
TF Rep_456_c_45 Rep_456_c_45_18 22854 26888 + HTH_AraC
sulfatase Rep_456_c_45 Rep_456_c_45_19 26892 28058 + S1_4
TC Rep_456_c_45 Rep_456_c_45_20 28329 31526 + 1.B.14.6.1
TC Rep_456_c_45 Rep_456_c_45_21 31537 33219 + 8.A.46.1.3
CAZyme Rep_456_c_45 Rep_456_c_45_22 33307 34596 + GH88
CAZyme Rep_456_c_45 Rep_456_c_45_23 34613 36610 + PL12_2
Gene ID: Rep_456_c_45_15
Type: CAZyme
Location: 17476 - 18645 (-)
Gene ID: Rep_456_c_45_16
Type: sulfatase
Location: 18709 - 20670 (-)
Gene ID: Rep_456_c_45_17
Type: CAZyme
Location: 20918 - 22816 (+)
Gene ID: Rep_456_c_45_18
Type: TF
Location: 22854 - 26888 (+)
Gene ID: Rep_456_c_45_19
Type: sulfatase
Location: 26892 - 28058 (+)
Gene ID: Rep_456_c_45_20
Type: TC
Location: 28329 - 31526 (+)
Gene ID: Rep_456_c_45_21
Type: TC
Location: 31537 - 33219 (+)
Gene ID: Rep_456_c_45_22
Type: CAZyme
Location: 33307 - 34596 (+)
Gene ID: Rep_456_c_45_23
Type: CAZyme
Location: 34613 - 36610 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_456_c_45_15 vegan > omnivore 1.46617 0.02809
Rep_456_c_45_15 vegetarian > omnivore 1.87471 0.00065

🧭 Explore Read Mapping of CGC

← Back to Cluster List