dbCAN HGM

Cluster: Rep_456_CGC62

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	Rep_456_c_22	Rep_456_c_22_1	263	2692	+	GH95
CAZyme	Rep_456_c_22	Rep_456_c_22_2	2722	3957	+	GH43_2
NULL(UNKNOWN)	Rep_456_c_22	Rep_456_c_22_3	4030	6612	-	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	Rep_456_c_22	Rep_456_c_22_4	6834	9698	+	GH3
CAZyme	Rep_456_c_22	Rep_456_c_22_5	9658	12033	+	GH31_4
CAZyme	Rep_456_c_22	Rep_456_c_22_6	12030	13739	+	CBM32 \| GH43_28
NULL(UNKNOWN)	Rep_456_c_22	Rep_456_c_22_7	14377	16158	+	NULL(UNKNOWN) [View Structural Homologs]
TC	Rep_456_c_22	Rep_456_c_22_8	16256	19447	+	1.B.14.6.1

Gene ID: Rep_456_c_22_1
Type: CAZyme
Location: 263 - 2692 (+)

Gene ID: Rep_456_c_22_2
Type: CAZyme
Location: 2722 - 3957 (+)

Gene ID: Rep_456_c_22_3
Type:
Location: 4030 - 6612 (-)

Gene ID: Rep_456_c_22_4
Type: CAZyme
Location: 6834 - 9698 (+)

Gene ID: Rep_456_c_22_5
Type: CAZyme
Location: 9658 - 12033 (+)

Gene ID: Rep_456_c_22_6
Type: CAZyme
Location: 12030 - 13739 (+)

Gene ID: Rep_456_c_22_7
Type:
Location: 14377 - 16158 (+)

Gene ID: Rep_456_c_22_8
Type: TC
Location: 16256 - 19447 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_456_c_22_1	vegetarian > omnivore	1.37971	0.00065
Rep_456_c_22_2	vegetarian > omnivore	1.44514	0.00065
Rep_456_c_22_4	vegan > omnivore	1.03637	0.02809
Rep_456_c_22_5	vegan > omnivore	2.12088	0.01529
Rep_456_c_22_5	vegetarian > omnivore	1.68798	0.00065
Rep_456_c_22_6	vegan > omnivore	1.33481	0.02809
Rep_456_c_22_6	vegetarian > omnivore	1.52943	0.00065

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_456_c_22_5	vegan > omnivore	1.08626	0.00035