Cluster: Rep_456_CGC60
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_456
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_456_c_21 | Rep_456_c_21_30 | 40579 | 42783 | + | 3.A.10.1.10 |
| CAZyme | Rep_456_c_21 | Rep_456_c_21_31 | 42866 | 44794 | - | GH63 |
| CAZyme | Rep_456_c_21 | Rep_456_c_21_32 | 44945 | 48097 | - | GH2 |
| TC | Rep_456_c_21 | Rep_456_c_21_33 | 48126 | 48731 | - | 2.A.124.1.2 |
| TC | Rep_456_c_21 | Rep_456_c_21_34 | 48728 | 49006 | - | 2.A.124.1.2 |
| pfam | Rep_456_c_21 | Rep_456_c_21_35 | 49115 | 50659 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_456_c_21 | Rep_456_c_21_36 | 50680 | 53802 | - | 1.B.14.6.1 |
Gene ID: Rep_456_c_21_30
Type: TC
Location: 40579 - 42783 (+)
Type: TC
Location: 40579 - 42783 (+)
Gene ID: Rep_456_c_21_31
Type: CAZyme
Location: 42866 - 44794 (-)
Type: CAZyme
Location: 42866 - 44794 (-)
Gene ID: Rep_456_c_21_32
Type: CAZyme
Location: 44945 - 48097 (-)
Type: CAZyme
Location: 44945 - 48097 (-)
Gene ID: Rep_456_c_21_33
Type: TC
Location: 48126 - 48731 (-)
Type: TC
Location: 48126 - 48731 (-)
Gene ID: Rep_456_c_21_34
Type: TC
Location: 48728 - 49006 (-)
Type: TC
Location: 48728 - 49006 (-)
Gene ID: Rep_456_c_21_35
Type: pfam
Location: 49115 - 50659 (-)
Type: pfam
Location: 49115 - 50659 (-)
Gene ID: Rep_456_c_21_36
Type: TC
Location: 50680 - 53802 (-)
Type: TC
Location: 50680 - 53802 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides sp900759525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.