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Cluster: Rep_456_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_456_c_0 Rep_456_c_0_137 202541 206149 + GH38
pfam Rep_456_c_0 Rep_456_c_0_138 206388 206642 - ParE_toxin | YoeB_toxin
pfam Rep_456_c_0 Rep_456_c_0_139 207222 208982 - PDDEXK_9 | AAA-ATPase_like
TC Rep_456_c_0 Rep_456_c_0_140 210679 212415 - 8.A.46.1.1
TC Rep_456_c_0 Rep_456_c_0_141 212427 215615 - 1.B.14.6.1
CAZyme Rep_456_c_0 Rep_456_c_0_142 215648 217660 - GH97
sulfatase Rep_456_c_0 Rep_456_c_0_143 217704 219284 - S1_11
CAZyme Rep_456_c_0 Rep_456_c_0_144 219327 221579 - CBM35
CAZyme Rep_456_c_0 Rep_456_c_0_145 221588 223051 - GH125
CAZyme Rep_456_c_0 Rep_456_c_0_146 223080 224282 - GH76
Gene ID: Rep_456_c_0_137
Type: CAZyme
Location: 202541 - 206149 (+)
Gene ID: Rep_456_c_0_138
Type: pfam
Location: 206388 - 206642 (-)
Gene ID: Rep_456_c_0_139
Type: pfam
Location: 207222 - 208982 (-)
Gene ID: Rep_456_c_0_140
Type: TC
Location: 210679 - 212415 (-)
Gene ID: Rep_456_c_0_141
Type: TC
Location: 212427 - 215615 (-)
Gene ID: Rep_456_c_0_142
Type: CAZyme
Location: 215648 - 217660 (-)
Gene ID: Rep_456_c_0_143
Type: sulfatase
Location: 217704 - 219284 (-)
Gene ID: Rep_456_c_0_144
Type: CAZyme
Location: 219327 - 221579 (-)
Gene ID: Rep_456_c_0_145
Type: CAZyme
Location: 221588 - 223051 (-)
Gene ID: Rep_456_c_0_146
Type: CAZyme
Location: 223080 - 224282 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_456_c_0_139 vegan > omnivore 1.26978 0.02809
Rep_456_c_0_139 vegetarian > omnivore 1.16792 0.00065

🧭 Explore Read Mapping of CGC

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