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Cluster: Rep_456_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_456_c_10 Rep_456_c_10_81 89360 89995 + 9.B.18.1.3
pfam Rep_456_c_10 Rep_456_c_10_82 90123 91439 + UDPG_MGDP_dh | NAD_Gly3P_dh_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
NULL(UNKNOWN) Rep_456_c_10 Rep_456_c_10_83 92257 92379 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_456_c_10 Rep_456_c_10_84 92476 93906 + 2.A.66.2.23
pfam Rep_456_c_10 Rep_456_c_10_85 93940 95052 + DegT_DnrJ_EryC1
NULL(UNKNOWN) Rep_456_c_10 Rep_456_c_10_86 95055 95588 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_456_c_10 Rep_456_c_10_87 95598 96575 + GT2
CAZyme Rep_456_c_10 Rep_456_c_10_88 96983 97870 + GT2
Gene ID: Rep_456_c_10_81
Type: TC
Location: 89360 - 89995 (+)
Gene ID: Rep_456_c_10_82
Type: pfam
Location: 90123 - 91439 (+)
Gene ID: Rep_456_c_10_83
Type:
Location: 92257 - 92379 (+)
Gene ID: Rep_456_c_10_84
Type: TC
Location: 92476 - 93906 (+)
Gene ID: Rep_456_c_10_85
Type: pfam
Location: 93940 - 95052 (+)
Gene ID: Rep_456_c_10_86
Type:
Location: 95055 - 95588 (+)
Gene ID: Rep_456_c_10_87
Type: CAZyme
Location: 95598 - 96575 (+)
Gene ID: Rep_456_c_10_88
Type: CAZyme
Location: 96983 - 97870 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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