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Cluster: Rep_456_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_456_c_8 Rep_456_c_8_3 1890 3644 + 3.A.2.3.3
TC Rep_456_c_8 Rep_456_c_8_4 3764 5092 + 3.A.2.3.3
pfam Rep_456_c_8 Rep_456_c_8_5 5118 5723 + ATP-synt_D
TC Rep_456_c_8 Rep_456_c_8_6 5720 7555 + 3.A.2.3.3
pfam Rep_456_c_8 Rep_456_c_8_7 7593 8012 + ATP-synt_C | ATP-synt_C
CAZyme Rep_456_c_8 Rep_456_c_8_8 8329 9990 + GT3
CAZyme Rep_456_c_8 Rep_456_c_8_9 10029 12593 + GT35
Gene ID: Rep_456_c_8_3
Type: TC
Location: 1890 - 3644 (+)
Gene ID: Rep_456_c_8_4
Type: TC
Location: 3764 - 5092 (+)
Gene ID: Rep_456_c_8_5
Type: pfam
Location: 5118 - 5723 (+)
Gene ID: Rep_456_c_8_6
Type: TC
Location: 5720 - 7555 (+)
Gene ID: Rep_456_c_8_7
Type: pfam
Location: 7593 - 8012 (+)
Gene ID: Rep_456_c_8_8
Type: CAZyme
Location: 8329 - 9990 (+)
Gene ID: Rep_456_c_8_9
Type: CAZyme
Location: 10029 - 12593 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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