dbCAN Logo

Cluster: Rep_456_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_456_c_6 Rep_456_c_6_96 129003 133136 - GH29 | PL8_2
CAZyme Rep_456_c_6 Rep_456_c_6_97 133149 136133 - GH2
pfam Rep_456_c_6 Rep_456_c_6_98 136338 138050 - SusD_RagB | SusD-like_3
TC Rep_456_c_6 Rep_456_c_6_99 138064 140823 - 1.B.14.6.1
pfam Rep_456_c_6 Rep_456_c_6_100 140855 142660 - SusD_RagB | SusD-like_3
TC Rep_456_c_6 Rep_456_c_6_101 142674 145835 - 1.B.14.6.1
CAZyme Rep_456_c_6 Rep_456_c_6_102 145900 147288 - GH88
TF Rep_456_c_6 Rep_456_c_6_103 147322 151374 + HTH_AraC
CAZyme Rep_456_c_6 Rep_456_c_6_104 151470 153914 + GH2
Gene ID: Rep_456_c_6_96
Type: CAZyme
Location: 129003 - 133136 (-)
Gene ID: Rep_456_c_6_97
Type: CAZyme
Location: 133149 - 136133 (-)
Gene ID: Rep_456_c_6_98
Type: pfam
Location: 136338 - 138050 (-)
Gene ID: Rep_456_c_6_99
Type: TC
Location: 138064 - 140823 (-)
Gene ID: Rep_456_c_6_100
Type: pfam
Location: 140855 - 142660 (-)
Gene ID: Rep_456_c_6_101
Type: TC
Location: 142674 - 145835 (-)
Gene ID: Rep_456_c_6_102
Type: CAZyme
Location: 145900 - 147288 (-)
Gene ID: Rep_456_c_6_103
Type: TF
Location: 147322 - 151374 (+)
Gene ID: Rep_456_c_6_104
Type: CAZyme
Location: 151470 - 153914 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List