dbCAN HGM

Cluster: Rep_456_CGC21

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_456_c_5	Rep_456_c_5_76	96955	98535	-	8.A.46.2.1
TC	Rep_456_c_5	Rep_456_c_5_77	98556	101663	-	1.B.14.6.13
pfam	Rep_456_c_5	Rep_456_c_5_78	101808	102401	+	DUF179
pfam	Rep_456_c_5	Rep_456_c_5_79	102398	102931	-	Acetyltransf_1 \| Acetyltransf_3 \| Acetyltransf_4
CAZyme	Rep_456_c_5	Rep_456_c_5_80	102934	104142	-	GT2

Gene ID: Rep_456_c_5_76
Type: TC
Location: 96955 - 98535 (-)

Gene ID: Rep_456_c_5_77
Type: TC
Location: 98556 - 101663 (-)

Gene ID: Rep_456_c_5_78
Type: pfam
Location: 101808 - 102401 (+)

Gene ID: Rep_456_c_5_79
Type: pfam
Location: 102398 - 102931 (-)

Gene ID: Rep_456_c_5_80
Type: CAZyme
Location: 102934 - 104142 (-)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_456_c_5_76	vegan > omnivore	1.74309	0.01792
Rep_456_c_5_76	vegetarian > omnivore	2.06790	0.00065
Rep_456_c_5_77	vegan > omnivore	1.23231	0.02809
Rep_456_c_5_77	vegetarian > omnivore	1.02007	0.00065
Rep_456_c_5_78	vegan > omnivore	2.79399	0.02809
Rep_456_c_5_78	vegetarian > omnivore	2.57371	0.00065
Rep_456_c_5_79	vegan > omnivore	1.51305	0.02809
Rep_456_c_5_79	vegetarian > omnivore	1.58359	0.00065
Rep_456_c_5_80	vegan > omnivore	1.29496	0.02809

Gene ID	Condition Pair	log2FC	FDR P-value
Rep_456_c_5_80	vegan > omnivore	1.04059	0.00035