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Cluster: Rep_456_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_456_c_0 Rep_456_c_0_58 76830 78401 + 3.D.10.1.4
pfam Rep_456_c_0 Rep_456_c_0_59 78616 79194 - Ferritin | Rubrerythrin | RUBY_RBDX
pfam Rep_456_c_0 Rep_456_c_0_60 79403 79699 + DUF4884
CAZyme Rep_456_c_0 Rep_456_c_0_61 79722 80807 - GH43_29
CAZyme Rep_456_c_0 Rep_456_c_0_62 80833 82869 - CBM51 | GH27
CAZyme Rep_456_c_0 Rep_456_c_0_63 82955 85576 - GH31_4
CAZyme Rep_456_c_0 Rep_456_c_0_64 85592 86953 - CBM6 | GH43_29
CAZyme Rep_456_c_0 Rep_456_c_0_65 86971 88911 - GH97
CAZyme Rep_456_c_0 Rep_456_c_0_66 88925 90550 - CBM91 | GH43_10
CAZyme Rep_456_c_0 Rep_456_c_0_67 90606 91991 - CBM6 | GH43_29
CAZyme Rep_456_c_0 Rep_456_c_0_68 92016 94430 - GH31_4
NULL(UNKNOWN) Rep_456_c_0 Rep_456_c_0_69 94475 94594 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_456_c_0 Rep_456_c_0_70 94591 96483 - GH97
CAZyme Rep_456_c_0 Rep_456_c_0_71 96514 98931 - GH146
CAZyme Rep_456_c_0 Rep_456_c_0_72 99428 101509 + GH43_35
Gene ID: Rep_456_c_0_58
Type: TC
Location: 76830 - 78401 (+)
Gene ID: Rep_456_c_0_59
Type: pfam
Location: 78616 - 79194 (-)
Gene ID: Rep_456_c_0_60
Type: pfam
Location: 79403 - 79699 (+)
Gene ID: Rep_456_c_0_61
Type: CAZyme
Location: 79722 - 80807 (-)
Gene ID: Rep_456_c_0_62
Type: CAZyme
Location: 80833 - 82869 (-)
Gene ID: Rep_456_c_0_63
Type: CAZyme
Location: 82955 - 85576 (-)
Gene ID: Rep_456_c_0_64
Type: CAZyme
Location: 85592 - 86953 (-)
Gene ID: Rep_456_c_0_65
Type: CAZyme
Location: 86971 - 88911 (-)
Gene ID: Rep_456_c_0_66
Type: CAZyme
Location: 88925 - 90550 (-)
Gene ID: Rep_456_c_0_67
Type: CAZyme
Location: 90606 - 91991 (-)
Gene ID: Rep_456_c_0_68
Type: CAZyme
Location: 92016 - 94430 (-)
Gene ID: Rep_456_c_0_69
Type:
Location: 94475 - 94594 (-)
Gene ID: Rep_456_c_0_70
Type: CAZyme
Location: 94591 - 96483 (-)
Gene ID: Rep_456_c_0_71
Type: CAZyme
Location: 96514 - 98931 (-)
Gene ID: Rep_456_c_0_72
Type: CAZyme
Location: 99428 - 101509 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_456_c_0_61 vegan > omnivore 1.16576 0.02809
Rep_456_c_0_61 vegetarian > omnivore 1.46584 0.00065
Rep_456_c_0_62 vegan > omnivore 2.25600 0.02809
Rep_456_c_0_62 vegetarian > omnivore 2.65714 0.00065
Rep_456_c_0_63 vegan > omnivore 1.27774 0.02809
Rep_456_c_0_63 vegetarian > omnivore 1.76794 0.00065
Rep_456_c_0_64 vegetarian > omnivore 1.21544 0.00065
Rep_456_c_0_65 vegetarian > omnivore 1.18553 0.00065
Rep_456_c_0_66 vegetarian > omnivore 1.94993 0.00065
Rep_456_c_0_66 vegan > omnivore 1.28086 0.02809
Rep_456_c_0_70 vegetarian > omnivore 1.64686 0.00065
Rep_456_c_0_70 vegan > omnivore 1.89008 0.02809
Rep_456_c_0_71 vegan > omnivore 1.23126 0.02809
Rep_456_c_0_72 vegan > omnivore 1.22577 0.02809
Rep_456_c_0_72 vegetarian > omnivore 1.73387 0.00065

🧭 Explore Read Mapping of CGC

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