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Cluster: Rep_450_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_450_c_0 Rep_450_c_0_623 768569 769456 + GH25
pfam Rep_450_c_0 Rep_450_c_0_624 769612 770919 + FtsX | MacB_PCD
pfam Rep_450_c_0 Rep_450_c_0_625 770926 772185 + FtsX
TC Rep_450_c_0 Rep_450_c_0_626 772204 772572 + 9.B.55.1.2
pfam Rep_450_c_0 Rep_450_c_0_627 772779 774392 - SusD_RagB | SusD-like_3
TC Rep_450_c_0 Rep_450_c_0_628 774427 777525 - 1.B.14.6.1
TC Rep_450_c_0 Rep_450_c_0_629 778050 781115 + 1.B.14.6.1
TC Rep_450_c_0 Rep_450_c_0_630 781143 782771 + 8.A.46.1.4
Gene ID: Rep_450_c_0_623
Type: CAZyme
Location: 768569 - 769456 (+)
Gene ID: Rep_450_c_0_624
Type: pfam
Location: 769612 - 770919 (+)
Gene ID: Rep_450_c_0_625
Type: pfam
Location: 770926 - 772185 (+)
Gene ID: Rep_450_c_0_626
Type: TC
Location: 772204 - 772572 (+)
Gene ID: Rep_450_c_0_627
Type: pfam
Location: 772779 - 774392 (-)
Gene ID: Rep_450_c_0_628
Type: TC
Location: 774427 - 777525 (-)
Gene ID: Rep_450_c_0_629
Type: TC
Location: 778050 - 781115 (+)
Gene ID: Rep_450_c_0_630
Type: TC
Location: 781143 - 782771 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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