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Cluster: Rep_450_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_450_c_2 Rep_450_c_2_201 246870 249851 - 2.A.6.4.3
peptidase Rep_450_c_2 Rep_450_c_2_202 250030 252117 - M03.UPA
pfam Rep_450_c_2 Rep_450_c_2_203 252145 253224 - Exo_endo_phos
TC Rep_450_c_2 Rep_450_c_2_204 253228 254121 - 9.B.104.1.2
peptidase Rep_450_c_2 Rep_450_c_2_205 254102 254779 - S54.025
pfam Rep_450_c_2 Rep_450_c_2_206 254986 255258 + Bac_DNA_binding | HU-HIG
CAZyme Rep_450_c_2 Rep_450_c_2_207 255342 258581 + GH2
Gene ID: Rep_450_c_2_201
Type: TC
Location: 246870 - 249851 (-)
Gene ID: Rep_450_c_2_202
Type: peptidase
Location: 250030 - 252117 (-)
Gene ID: Rep_450_c_2_203
Type: pfam
Location: 252145 - 253224 (-)
Gene ID: Rep_450_c_2_204
Type: TC
Location: 253228 - 254121 (-)
Gene ID: Rep_450_c_2_205
Type: peptidase
Location: 254102 - 254779 (-)
Gene ID: Rep_450_c_2_206
Type: pfam
Location: 254986 - 255258 (+)
Gene ID: Rep_450_c_2_207
Type: CAZyme
Location: 255342 - 258581 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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