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Cluster: Rep_450_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_450_c_1 Rep_450_c_1_148 161863 163515 + 2.A.1.42.2
pfam Rep_450_c_1 Rep_450_c_1_149 163563 164030 + DHOase
CAZyme Rep_450_c_1 Rep_450_c_1_150 164193 165584 - GH29
pfam Rep_450_c_1 Rep_450_c_1_151 165779 167539 - SusD_RagB | SusD-like_3
TC Rep_450_c_1 Rep_450_c_1_152 167554 170760 - 1.B.14.6.1
TC Rep_450_c_1 Rep_450_c_1_153 171339 174563 + 1.B.14.6.1
pfam Rep_450_c_1 Rep_450_c_1_154 174579 176591 + SusD_RagB | SusD-like_3
CAZyme Rep_450_c_1 Rep_450_c_1_155 176714 178906 - GH92
Gene ID: Rep_450_c_1_148
Type: TC
Location: 161863 - 163515 (+)
Gene ID: Rep_450_c_1_149
Type: pfam
Location: 163563 - 164030 (+)
Gene ID: Rep_450_c_1_150
Type: CAZyme
Location: 164193 - 165584 (-)
Gene ID: Rep_450_c_1_151
Type: pfam
Location: 165779 - 167539 (-)
Gene ID: Rep_450_c_1_152
Type: TC
Location: 167554 - 170760 (-)
Gene ID: Rep_450_c_1_153
Type: TC
Location: 171339 - 174563 (+)
Gene ID: Rep_450_c_1_154
Type: pfam
Location: 174579 - 176591 (+)
Gene ID: Rep_450_c_1_155
Type: CAZyme
Location: 176714 - 178906 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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