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Cluster: Rep_450_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_450_c_0 Rep_450_c_0_1874 2235758 2236144 + 1.A.43.1.13
pfam Rep_450_c_0 Rep_450_c_0_1875 2236207 2237502 + Enolase_C | Enolase_N
TC Rep_450_c_0 Rep_450_c_0_1876 2237626 2240037 - 2.A.16.2.2
pfam Rep_450_c_0 Rep_450_c_0_1877 2240460 2240993 + DUF4199
CAZyme Rep_450_c_0 Rep_450_c_0_1878 2240999 2241952 + GT2
pfam Rep_450_c_0 Rep_450_c_0_1879 2241955 2242503 + DUF6452
pfam Rep_450_c_0 Rep_450_c_0_1880 2242457 2243161 + DUF6048
TC Rep_450_c_0 Rep_450_c_0_1881 2243165 2243737 + 2.A.107.1.2
Gene ID: Rep_450_c_0_1874
Type: TC
Location: 2235758 - 2236144 (+)
Gene ID: Rep_450_c_0_1875
Type: pfam
Location: 2236207 - 2237502 (+)
Gene ID: Rep_450_c_0_1876
Type: TC
Location: 2237626 - 2240037 (-)
Gene ID: Rep_450_c_0_1877
Type: pfam
Location: 2240460 - 2240993 (+)
Gene ID: Rep_450_c_0_1878
Type: CAZyme
Location: 2240999 - 2241952 (+)
Gene ID: Rep_450_c_0_1879
Type: pfam
Location: 2241955 - 2242503 (+)
Gene ID: Rep_450_c_0_1880
Type: pfam
Location: 2242457 - 2243161 (+)
Gene ID: Rep_450_c_0_1881
Type: TC
Location: 2243165 - 2243737 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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