dbCAN Logo

Cluster: Rep_443_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_443_c_0 Rep_443_c_0_771 1014782 1016257 - 2.A.1.14.25
CAZyme Rep_443_c_0 Rep_443_c_0_772 1016606 1018840 + GH182
CAZyme Rep_443_c_0 Rep_443_c_0_773 1018934 1020859 - GH146
pfam Rep_443_c_0 Rep_443_c_0_774 1020882 1023155 - Hepar_II_III_C | DUF4962
CAZyme Rep_443_c_0 Rep_443_c_0_775 1023315 1025243 + GH97
Gene ID: Rep_443_c_0_771
Type: TC
Location: 1014782 - 1016257 (-)
Gene ID: Rep_443_c_0_772
Type: CAZyme
Location: 1016606 - 1018840 (+)
Gene ID: Rep_443_c_0_773
Type: CAZyme
Location: 1018934 - 1020859 (-)
Gene ID: Rep_443_c_0_774
Type: pfam
Location: 1020882 - 1023155 (-)
Gene ID: Rep_443_c_0_775
Type: CAZyme
Location: 1023315 - 1025243 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
Rep_443_c_0_771 vegan > omnivore 1.49560 0.00498
Rep_443_c_0_771 vegetarian > omnivore 1.46313 0.00565
Rep_443_c_0_772 vegan > omnivore 1.36880 0.00498
Rep_443_c_0_772 vegetarian > omnivore 1.43260 0.00565
Rep_443_c_0_774 vegan > omnivore 1.39855 0.00498
Rep_443_c_0_774 vegetarian > omnivore 1.47769 0.00565
Rep_443_c_0_775 vegan > omnivore 1.11622 0.00498
Rep_443_c_0_775 vegetarian > omnivore 1.35236 0.00565

🧭 Explore Read Mapping of CGC

← Back to Cluster List