Cluster: Rep_439_CGC55
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_439
- CGC Family ID: CGCFAM_05970
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_439_c_5 | Rep_439_c_5_47 | 57750 | 58553 | - | 1.B.42.1.2 |
| TC | Rep_439_c_5 | Rep_439_c_5_48 | 58689 | 59435 | + | 3.A.1.27.2 |
| TC | Rep_439_c_5 | Rep_439_c_5_49 | 59438 | 60193 | + | 3.A.1.27.5 |
| NULL(UNKNOWN) | Rep_439_c_5 | Rep_439_c_5_50 | 60346 | 61128 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_439_c_5 | Rep_439_c_5_51 | 61144 | 61797 | + | Glycos_transf_2 |
| CAZyme | Rep_439_c_5 | Rep_439_c_5_52 | 61828 | 62868 | + | GT113 |
Gene ID: Rep_439_c_5_47
Type: TC
Location: 57750 - 58553 (-)
Type: TC
Location: 57750 - 58553 (-)
Gene ID: Rep_439_c_5_48
Type: TC
Location: 58689 - 59435 (+)
Type: TC
Location: 58689 - 59435 (+)
Gene ID: Rep_439_c_5_49
Type: TC
Location: 59438 - 60193 (+)
Type: TC
Location: 59438 - 60193 (+)
Gene ID: Rep_439_c_5_50
Type:
Location: 60346 - 61128 (+)
Type:
Location: 60346 - 61128 (+)
Gene ID: Rep_439_c_5_51
Type: pfam
Location: 61144 - 61797 (+)
Type: pfam
Location: 61144 - 61797 (+)
Gene ID: Rep_439_c_5_52
Type: CAZyme
Location: 61828 - 62868 (+)
Type: CAZyme
Location: 61828 - 62868 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Paraprevotella
Species
Paraprevotella sp905215575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.