PROTEIN: Rep_439_c_5_50
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Protein File & Metadata
Source:
Rep_439_c_5_50.pdb
Genome ID:
Protein ID:
Rep_439_c_5_50
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Protein Sequence
MAKQQVIVSL TSFPAAIPYA TQAIRSILNG SILPDKIVLY LTFSQFEEKG IPADLLELSE 60 NNPIFEIRNY DQDIRSYRKL IPALQDFPDA IIVTIDDDVA YHKHMLRDLL RLHAQIPKAV 120 LAHRAKKIKP GSPYKQWKKY RWYHFLLKKI HLDYRNIQTG VGGVLYPPKA LKAEMLNIDL 180 FTQIAPTTDD IWFWAAGVAN GIPVIPVPFG YNKPKGLKKP RELSLKTTNF KTGTDRNAAA 240 LQAIIEKWPE IGKRIDYNLK 260
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CI93-F1-model_v4 | 1 | 259 | 4 | 265 | 0.6993 |
0.7374 |
| AF-Q57022-F1-model_v4 | 1 | 257 | 1 | 236 | 0.6991 |
0.7774 |
| AF-Q0P9A9-F1-model_v4 | 3 | 260 | 1 | 256 | 0.6957 |
0.7501 |
| AF-P36667-F1-model_v4 | 5 | 253 | 1 | 255 | 0.688 |
0.7488 |
| AF-Q48215-F1-model_v4 | 4 | 260 | 1 | 240 | 0.6863 |
0.7736 |
| AF-I1MD27-F1-model_v4 | 1 | 255 | 40 | 299 | 0.6827 |
0.7907 |
| AF-Q9C975-F1-model_v4 | 1 | 256 | 41 | 302 | 0.6767 |
0.785 |
| AF-O24928-F1-model_v4 | 3 | 257 | 1 | 235 | 0.6754 |
0.766 |
| AF-A0A0N4UMA5-F1-model_v4 | 2 | 248 | 18 | 276 | 0.675 |
0.7547 |
| AF-A0A0R0GDK3-F1-model_v4 | 1 | 256 | 40 | 291 | 0.6727 |
0.7788 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-F0R503-F1-model_v4 | GT0 | 1 | 257 | 2 | 258 | 0.9459 |
0.9677 |
| AF-Q7VK28-F1-model_v4 | GT0 | 5 | 260 | 1 | 256 | 0.8962 |
0.922 |
| AF-A0A346MS06-F1-model_v4 | GT0 | 1 | 257 | 4 | 255 | 0.8744 |
0.9198 |
| AF-Q74IJ0-F1-model_v4 | GT0 | 1 | 257 | 4 | 255 | 0.8738 |
0.9193 |
| AF-A0A6B9HYZ4-F1-model_v4 | GT0 | 1 | 257 | 4 | 255 | 0.8727 |
0.9183 |
| A0A9X7TCI1 | GT0 | 1 | 257 | 4 | 255 | 0.8663 |
0.9123 |
| AF-F4LMH6-F1-model_v4 | GT0 | 3 | 257 | 27 | 278 | 0.8474 |
0.9169 |
| AF-E6W6P2-F1-model_v4 | GT0 | 3 | 256 | 31 | 273 | 0.8458 |
0.9374 |
| AF-C1DH71-F1-model_v4 | GT0 | 6 | 258 | 1 | 242 | 0.8444 |
0.911 |
| A0A376TFF7 | GT0 | 2 | 257 | 35 | 286 | 0.8444 |
0.926 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AOC95292.1 | GT2 | 1 | 260 | 3 | 246 | 0.7273 |
0.8088 |
| WFB35672.1 | GT2 | 1 | 260 | 1 | 258 | 0.7218 |
0.7681 |
| C2EGY1 | GT2 | 2 | 260 | 1 | 262 | 0.7176 |
0.7523 |
| A0ZGF1 | GT2 | 1 | 260 | 21 | 276 | 0.7159 |
0.7707 |
| ATU34594.1 | GT2 | 3 | 260 | 1 | 234 | 0.7157 |
0.8134 |
| A0A7G9BPV5 | GT2 | 1 | 260 | 1 | 248 | 0.7137 |
0.7848 |
| A0A378U4N0 | GT2 | 1 | 260 | 1 | 244 | 0.712 |
0.7891 |
| A0A642HPB2 | GT2 | 3 | 260 | 1 | 251 | 0.711 |
0.7787 |
| A0A6H1ZAT1 | GT2 | 4 | 259 | 1 | 225 | 0.7079 |
0.7853 |
| A0A7T1MPS3 | GT2 | 1 | 260 | 2 | 258 | 0.7069 |
0.7416 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1on8-assembly1.cif.gz_A | 2 | 256 | 1 | 249 | 0.7248 |
0.7872 |
| 1on8-assembly1.cif.gz_B | 2 | 256 | 1 | 246 | 0.7245 |
0.7912 |
| 5z8b-assembly1.cif.gz_A | 5 | 221 | 1 | 199 | 0.715 |
0.8487 |
| 1on6-assembly1.cif.gz_B | 1 | 256 | 1 | 241 | 0.7149 |
0.7885 |
| 1omz-assembly1.cif.gz_B | 1 | 256 | 1 | 239 | 0.7141 |
0.7898 |
| 1omx-assembly1.cif.gz_A | 2 | 256 | 1 | 234 | 0.6971 |
0.7813 |
| 1qgs-assembly1.cif.gz_A | 4 | 255 | 1 | 238 | 0.6873 |
0.7402 |
| 3juk-assembly1.cif.gz_D | 3 | 223 | 1 | 253 | 0.5884 |
0.7128 |
| 7f67-assembly1.cif.gz_E | 4 | 224 | 1 | 226 | 0.5858 |
0.6838 |
| 4d11-assembly3.cif.gz_C | 2 | 260 | 53 | 354 | 0.5839 |
0.7466 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4KXC9-F1-model_v4 | 1 | 260 | 4 | 245 | 0.7139 |
0.7803 |
| AF-Q03084-F1-model_v4 | 1 | 260 | 3 | 247 | 0.6995 |
0.7829 |
| AF-Q57022-F1-model_v4 | 1 | 257 | 1 | 236 | 0.6991 |
0.7774 |
| AF-O32268-F1-model_v4 | 1 | 258 | 3 | 240 | 0.6952 |
0.7693 |
| AF-Q46635-F1-model_v4 | 5 | 260 | 1 | 239 | 0.6936 |
0.7821 |
| AF-Q48215-F1-model_v4 | 4 | 260 | 1 | 240 | 0.6863 |
0.7736 |
| AF-B5L3F2-F1-model_v4 | 1 | 260 | 1 | 230 | 0.6835 |
0.7814 |
| AF-P71054-F1-model_v4 | 1 | 260 | 2 | 245 | 0.6788 |
0.7675 |
| AF-Q9C975-F1-model_v4 | 1 | 256 | 41 | 302 | 0.6767 |
0.785 |
| AF-Q077R2-F1-model_v4 | 3 | 259 | 1 | 231 | 0.675 |
0.766 |