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Cluster: Rep_426_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_426_c_0 Rep_426_c_0_478 577386 578636 - 3.A.1.125.1
STP Rep_426_c_0 Rep_426_c_0_479 578633 579832 - Aminotran_1_2
CAZyme Rep_426_c_0 Rep_426_c_0_480 580050 580769 - GT26
CAZyme Rep_426_c_0 Rep_426_c_0_481 580808 581935 - GT4
NULL(UNKNOWN) Rep_426_c_0 Rep_426_c_0_482 581923 582447 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_426_c_0 Rep_426_c_0_483 582593 583690 - GT4
NULL(UNKNOWN) Rep_426_c_0 Rep_426_c_0_484 583704 584219 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_426_c_0 Rep_426_c_0_485 584565 585686 - GT4
pfam Rep_426_c_0 Rep_426_c_0_486 585689 586273 - Hexapep
CAZyme Rep_426_c_0 Rep_426_c_0_487 586296 587117 - GT2
Gene ID: Rep_426_c_0_478
Type: TC
Location: 577386 - 578636 (-)
Gene ID: Rep_426_c_0_479
Type: STP
Location: 578633 - 579832 (-)
Gene ID: Rep_426_c_0_480
Type: CAZyme
Location: 580050 - 580769 (-)
Gene ID: Rep_426_c_0_481
Type: CAZyme
Location: 580808 - 581935 (-)
Gene ID: Rep_426_c_0_482
Type:
Location: 581923 - 582447 (-)
Gene ID: Rep_426_c_0_483
Type: CAZyme
Location: 582593 - 583690 (-)
Gene ID: Rep_426_c_0_484
Type:
Location: 583704 - 584219 (-)
Gene ID: Rep_426_c_0_485
Type: CAZyme
Location: 584565 - 585686 (-)
Gene ID: Rep_426_c_0_486
Type: pfam
Location: 585689 - 586273 (-)
Gene ID: Rep_426_c_0_487
Type: CAZyme
Location: 586296 - 587117 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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