Cluster: Rep_426_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_426
- CGC Family ID: CGCFAM_11249
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_426_c_0 | Rep_426_c_0_154 | 192552 | 194069 | - | CE12 |
| sulfatase | Rep_426_c_0 | Rep_426_c_0_155 | 194097 | 195392 | - | S1_16 |
| NULL(UNKNOWN) | Rep_426_c_0 | Rep_426_c_0_156 | 195539 | 196033 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_426_c_0 | Rep_426_c_0_157 | 196203 | 197657 | + | 2.A.66.2.6 |
| CAZyme | Rep_426_c_0 | Rep_426_c_0_158 | 197668 | 198582 | + | GT2 |
Gene ID: Rep_426_c_0_154
Type: CAZyme
Location: 192552 - 194069 (-)
Type: CAZyme
Location: 192552 - 194069 (-)
Gene ID: Rep_426_c_0_155
Type: sulfatase
Location: 194097 - 195392 (-)
Type: sulfatase
Location: 194097 - 195392 (-)
Gene ID: Rep_426_c_0_156
Type:
Location: 195539 - 196033 (+)
Type:
Location: 195539 - 196033 (+)
Gene ID: Rep_426_c_0_157
Type: TC
Location: 196203 - 197657 (+)
Type: TC
Location: 196203 - 197657 (+)
Gene ID: Rep_426_c_0_158
Type: CAZyme
Location: 197668 - 198582 (+)
Type: CAZyme
Location: 197668 - 198582 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA11471
Genus
Caccoplasma
Species
Caccoplasma intestinavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_426_c_0_154 | vegetarian > vegan | 2.02296 | 0.00160 |
| Rep_426_c_0_155 | vegetarian > vegan | 2.46415 | 0.00160 |
| Rep_426_c_0_157 | vegetarian > vegan | 1.61167 | 0.00160 |
| Rep_426_c_0_158 | vegetarian > vegan | 2.29114 | 0.00160 |