dbCAN HGM

Cluster: Rep_426_CGC26

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_426_c_0	Rep_426_c_0_1485	1757435	1757806	+	9.B.124.1.3
pfam	Rep_426_c_0	Rep_426_c_0_1486	1757872	1760001	-	DEAD \| Helicase_C \| ResIII \| RecG_wedge \| RecG_dom3_C
pfam	Rep_426_c_0	Rep_426_c_0_1487	1759961	1760635	-	IspD \| NTP_transf_3
CAZyme	Rep_426_c_0	Rep_426_c_0_1488	1760788	1761834	+	CBM50
pfam	Rep_426_c_0	Rep_426_c_0_1489	1761872	1765090	+	MGS \| ATP-grasp \| ATP-grasp \| CPSase_L_D2 \| CPSase_L_D2 \| CPSase_L_D3 \| Dala_Dala_lig_C
TC	Rep_426_c_0	Rep_426_c_0_1490	1765262	1767463	+	3.A.10.1.10
CAZyme	Rep_426_c_0	Rep_426_c_0_1491	1767804	1769801	-	CBM91 \| GH43_10

Gene ID: Rep_426_c_0_1485
Type: TC
Location: 1757435 - 1757806 (+)

Gene ID: Rep_426_c_0_1486
Type: pfam
Location: 1757872 - 1760001 (-)

Gene ID: Rep_426_c_0_1487
Type: pfam
Location: 1759961 - 1760635 (-)

Gene ID: Rep_426_c_0_1488
Type: CAZyme
Location: 1760788 - 1761834 (+)

Gene ID: Rep_426_c_0_1489
Type: pfam
Location: 1761872 - 1765090 (+)

Gene ID: Rep_426_c_0_1490
Type: TC
Location: 1765262 - 1767463 (+)

Gene ID: Rep_426_c_0_1491
Type: CAZyme
Location: 1767804 - 1769801 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Gene ID	Condition Pair	log2FC	FDR P-value
Rep_426_c_0_1485	vegetarian > vegan	1.76396	0.00160
Rep_426_c_0_1488	vegetarian > vegan	1.46831	0.00160